Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2929

Experiment: Ying_Nucleobase14 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 3
3,420,514	+				-0.6
3,420,591	+				-1.7
3,420,592	-				+0.3
3,420,592	-				-0.9
3,420,641	+		Pf6N2E2_2928	0.16	+0.3
3,420,641	+		Pf6N2E2_2928	0.16	+0.3
3,420,641	+		Pf6N2E2_2928	0.16	-2.0
3,420,642	-		Pf6N2E2_2928	0.16	+0.3
3,420,642	-		Pf6N2E2_2928	0.16	-0.7
3,420,642	-		Pf6N2E2_2928	0.16	+0.3
3,420,642	-		Pf6N2E2_2928	0.16	-1.7
3,420,642	-		Pf6N2E2_2928	0.16	-0.6
3,420,872	+		Pf6N2E2_2928	0.42	+0.3
3,420,873	-		Pf6N2E2_2928	0.42	+0.3
3,420,938	-		Pf6N2E2_2928	0.50	-1.3
3,420,938	-		Pf6N2E2_2928	0.50	+0.3
3,420,965	+		Pf6N2E2_2928	0.53	-1.3
3,420,965	+		Pf6N2E2_2928	0.53	-0.4
3,420,966	-		Pf6N2E2_2928	0.53	-0.7
3,420,966	-		Pf6N2E2_2928	0.53	+0.3
3,421,064	+		Pf6N2E2_2928	0.64	+0.3
3,421,064	+		Pf6N2E2_2928	0.64	+0.3
3,421,065	-		Pf6N2E2_2928	0.64	+0.3
3,421,194	+		Pf6N2E2_2928	0.79	-0.4
3,421,238	+		Pf6N2E2_2928	0.84	+0.0
3,421,239	-		Pf6N2E2_2928	0.84	-0.7
3,421,239	-		Pf6N2E2_2928	0.84	+0.3
3,421,239	-		Pf6N2E2_2928	0.84	-1.9
3,421,239	-		Pf6N2E2_2928	0.84	+0.3
3,421,239	-		Pf6N2E2_2928	0.84	-1.0
3,421,239	-		Pf6N2E2_2928	0.84	-0.7
3,421,585	+		Pf6N2E2_2929	0.28	+0.3
3,421,585	+		Pf6N2E2_2929	0.28	-0.7
3,421,585	+		Pf6N2E2_2929	0.28	-0.7
3,421,585	+		Pf6N2E2_2929	0.28	-0.7
3,421,586	-		Pf6N2E2_2929	0.28	-0.7
3,421,684	+		Pf6N2E2_2929	0.41	+0.3
3,421,685	-		Pf6N2E2_2929	0.41	+0.3
3,421,685	-		Pf6N2E2_2929	0.41	-1.9
3,422,101	+				-1.0
3,422,101	+				+0.9
3,422,101	+				+0.3
3,422,101	+				-0.7
3,422,102	-				+0.3
3,422,102	-				-0.7
3,422,108	+				+0.3
3,422,108	+				-0.7
3,422,108	+				-0.4
3,422,109	-				+0.8
3,422,121	-				+0.3
3,422,121	-				+0.3
3,422,513	+		Pf6N2E2_2930	0.80	+0.3
3,422,513	+		Pf6N2E2_2930	0.80	+0.7
3,422,513	+		Pf6N2E2_2930	0.80	+0.3
3,422,513	+		Pf6N2E2_2930	0.80	-0.7
3,422,513	+		Pf6N2E2_2930	0.80	-0.7
3,422,536	-		Pf6N2E2_2930	0.85	-0.7
3,422,620	+				+0.3
3,422,621	-				+0.3
3,422,621	-				+0.3
3,422,621	-				-0.7
3,422,621	-				-1.7
3,422,693	-				-0.0
3,422,747	-				-0.9
3,422,747	-				+0.3
3,422,788	+		Pf6N2E2_2931	0.10	-1.5
3,422,803	+		Pf6N2E2_2931	0.12	+0.3
3,422,803	+		Pf6N2E2_2931	0.12	-1.3
3,422,803	+		Pf6N2E2_2931	0.12	-0.7
3,422,804	-		Pf6N2E2_2931	0.12	-0.7
3,422,804	-		Pf6N2E2_2931	0.12	-0.7
3,422,804	-		Pf6N2E2_2931	0.12	-0.7
3,422,804	-		Pf6N2E2_2931	0.12	-1.5
3,422,804	-		Pf6N2E2_2931	0.12	-0.9
3,422,938	+		Pf6N2E2_2931	0.26	+0.3
3,422,938	+		Pf6N2E2_2931	0.26	-1.3
3,422,939	-		Pf6N2E2_2931	0.26	-0.4
3,422,939	-		Pf6N2E2_2931	0.26	+0.3
3,422,946	-		Pf6N2E2_2931	0.27	+0.3
3,422,998	+		Pf6N2E2_2931	0.32	+0.3
3,422,999	-		Pf6N2E2_2931	0.32	+0.3
3,422,999	-		Pf6N2E2_2931	0.32	-0.7
3,422,999	-		Pf6N2E2_2931	0.32	-0.7
3,423,022	+		Pf6N2E2_2931	0.35	+0.3
3,423,022	+		Pf6N2E2_2931	0.35	-0.7
3,423,023	-		Pf6N2E2_2931	0.35	-2.0
3,423,023	-		Pf6N2E2_2931	0.35	-0.7
3,423,029	+		Pf6N2E2_2931	0.35	+0.3
3,423,082	+		Pf6N2E2_2931	0.41	+0.3