Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2576

Experiment: Ying_Nucleobase14 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 3
3,033,308	-		Pf6N2E2_2575	0.31	-0.7
3,033,308	-		Pf6N2E2_2575	0.31	+0.3
3,033,479	-		Pf6N2E2_2575	0.44	+0.3
3,033,479	-		Pf6N2E2_2575	0.44	-0.7
3,033,479	-		Pf6N2E2_2575	0.44	+0.3
3,033,479	-		Pf6N2E2_2575	0.44	+0.3
3,033,479	-		Pf6N2E2_2575	0.44	+0.3
3,033,479	-		Pf6N2E2_2575	0.44	-5.7
3,033,479	-		Pf6N2E2_2575	0.44	+0.3
3,033,479	-		Pf6N2E2_2575	0.44	-3.3
3,034,102	-		Pf6N2E2_2575	0.90	+0.3
3,034,102	-		Pf6N2E2_2575	0.90	+0.3
3,034,104	-		Pf6N2E2_2575	0.90	+0.3
3,034,240	-				+0.3
3,034,248	-				+0.9
3,034,313	-				-0.2
3,034,518	-		Pf6N2E2_2576	0.13	-0.7
3,034,528	-		Pf6N2E2_2576	0.13	+0.3
3,034,581	+		Pf6N2E2_2576	0.15	+0.3
3,034,582	-		Pf6N2E2_2576	0.16	-0.5
3,034,582	-		Pf6N2E2_2576	0.16	-1.3
3,034,582	-		Pf6N2E2_2576	0.16	-1.7
3,034,582	-		Pf6N2E2_2576	0.16	-1.3
3,034,582	-		Pf6N2E2_2576	0.16	-0.7
3,034,582	-		Pf6N2E2_2576	0.16	-1.7
3,034,582	-		Pf6N2E2_2576	0.16	-1.8
3,034,644	-		Pf6N2E2_2576	0.18	-1.7
3,034,686	-		Pf6N2E2_2576	0.20	+0.3
3,034,686	-		Pf6N2E2_2576	0.20	+0.3
3,034,686	-		Pf6N2E2_2576	0.20	-0.7
3,034,686	-		Pf6N2E2_2576	0.20	+0.3
3,034,692	+		Pf6N2E2_2576	0.21	-0.7
3,034,692	+		Pf6N2E2_2576	0.21	+0.2
3,034,692	+		Pf6N2E2_2576	0.21	-0.7
3,034,692	+		Pf6N2E2_2576	0.21	+0.3
3,034,692	+		Pf6N2E2_2576	0.21	-0.7
3,034,693	-		Pf6N2E2_2576	0.21	+0.3
3,034,693	-		Pf6N2E2_2576	0.21	+0.3
3,034,693	-		Pf6N2E2_2576	0.21	+0.6
3,034,693	-		Pf6N2E2_2576	0.21	-0.7
3,034,693	-		Pf6N2E2_2576	0.21	+0.3
3,034,810	-		Pf6N2E2_2576	0.26	+0.5
3,034,864	+		Pf6N2E2_2576	0.29	-0.5
3,034,864	+		Pf6N2E2_2576	0.29	+0.3
3,034,864	+		Pf6N2E2_2576	0.29	+0.9
3,034,864	+		Pf6N2E2_2576	0.29	+1.0
3,034,898	+		Pf6N2E2_2576	0.30	-0.0
3,034,917	-		Pf6N2E2_2576	0.31	-1.3
3,034,919	-		Pf6N2E2_2576	0.31	+0.3
3,035,017	+		Pf6N2E2_2576	0.36	-0.7
3,035,017	+		Pf6N2E2_2576	0.36	+0.2
3,035,056	+		Pf6N2E2_2576	0.38	-0.7
3,035,057	-		Pf6N2E2_2576	0.38	+0.3
3,035,407	+		Pf6N2E2_2576	0.54	-0.7
3,035,408	-		Pf6N2E2_2576	0.54	-1.3
3,035,408	-		Pf6N2E2_2576	0.54	+0.3
3,035,408	-		Pf6N2E2_2576	0.54	-0.7
3,035,408	-		Pf6N2E2_2576	0.54	+0.6
3,035,656	+		Pf6N2E2_2576	0.66	-0.7
3,035,656	+		Pf6N2E2_2576	0.66	+0.2
3,035,738	+		Pf6N2E2_2576	0.70	+0.8
3,035,738	+		Pf6N2E2_2576	0.70	+1.0
3,035,739	-		Pf6N2E2_2576	0.70	+0.3
3,035,797	+		Pf6N2E2_2576	0.72	+0.3
3,035,797	+		Pf6N2E2_2576	0.72	-0.7
3,035,916	-		Pf6N2E2_2576	0.78	+0.5
3,035,916	-		Pf6N2E2_2576	0.78	+0.3
3,036,013	+		Pf6N2E2_2576	0.83	-0.5
3,036,013	+		Pf6N2E2_2576	0.83	-1.3
3,036,013	+		Pf6N2E2_2576	0.83	-0.7
3,036,014	-		Pf6N2E2_2576	0.83	-0.3
3,036,014	-		Pf6N2E2_2576	0.83	+1.0
3,036,014	-		Pf6N2E2_2576	0.83	+0.3
3,036,014	-		Pf6N2E2_2576	0.83	-0.7
3,036,014	-		Pf6N2E2_2576	0.83	+0.5
3,036,190	+				-0.7
3,036,190	+				+0.3
3,036,191	-				-0.7
3,036,191	-				-0.7
3,036,191	-				+0.3
3,036,191	-				-0.7
3,036,192	+				-0.7
3,036,192	+				-0.7
3,036,192	+				+0.3
3,036,192	+				+0.3
3,036,192	+				+0.3
3,036,192	+				+0.3
3,036,193	-				-1.7
3,036,193	-				+0.3
3,036,193	-				-1.3
3,036,193	-				+0.3
3,036,336	+				-0.7
3,036,384	+				+0.0
3,036,384	+				+0.3
3,036,384	+				+0.9
3,036,385	-				-0.7
3,036,439	+				-0.7
3,036,473	-				+0.3
3,036,488	+				-1.1
3,036,539	-				+0.3
3,036,539	-				-0.7
3,036,539	-				-0.7
3,036,586	-				+0.3
3,036,642	-				-0.5
3,036,642	-				-0.7
3,036,713	-				+0.3
3,036,813	-				+0.3
3,036,818	+				-0.7
3,036,818	+				-0.7
3,036,845	+		Pf6N2E2_2577	0.11	+0.3
3,036,846	-		Pf6N2E2_2577	0.11	+0.3
3,036,884	+		Pf6N2E2_2577	0.14	+0.3
3,036,888	-		Pf6N2E2_2577	0.15	+0.3
3,037,019	+		Pf6N2E2_2577	0.26	+1.0
3,037,020	-		Pf6N2E2_2577	0.26	-0.7
3,037,020	-		Pf6N2E2_2577	0.26	+0.9
3,037,037	+		Pf6N2E2_2577	0.28	-0.7
3,037,175	-		Pf6N2E2_2577	0.40	-0.7
3,037,214	+		Pf6N2E2_2577	0.43	+0.0
3,037,215	-		Pf6N2E2_2577	0.43	+0.3
3,037,215	-		Pf6N2E2_2577	0.43	+0.4
3,037,300	-		Pf6N2E2_2577	0.51	+0.3