Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1951

Experiment: Ying_Nucleobase14 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 3
2,314,874	-		Pf6N2E2_1950	0.51	+0.2
2,314,942	+		Pf6N2E2_1950	0.57	+0.2
2,314,942	+		Pf6N2E2_1950	0.57	-0.7
2,314,943	-		Pf6N2E2_1950	0.57	-0.8
2,314,943	-		Pf6N2E2_1950	0.57	-0.8
2,314,944	+		Pf6N2E2_1950	0.57	-0.1
2,314,944	+		Pf6N2E2_1950	0.57	-0.8
2,315,013	+		Pf6N2E2_1950	0.63	+0.2
2,315,013	+		Pf6N2E2_1950	0.63	+0.2
2,315,014	-		Pf6N2E2_1950	0.63	+0.2
2,315,118	+		Pf6N2E2_1950	0.72	+0.2
2,315,118	+		Pf6N2E2_1950	0.72	+0.2
2,315,119	-		Pf6N2E2_1950	0.72	+0.2
2,315,119	-		Pf6N2E2_1950	0.72	+0.2
2,315,139	+		Pf6N2E2_1950	0.74	+0.2
2,315,139	+		Pf6N2E2_1950	0.74	-0.8
2,315,161	+		Pf6N2E2_1950	0.76	+0.2
2,315,162	-		Pf6N2E2_1950	0.76	+0.2
2,315,162	-		Pf6N2E2_1950	0.76	+0.2
2,315,242	+		Pf6N2E2_1950	0.82	+0.2
2,315,520	+				+0.2
2,315,554	-				-1.4
2,315,569	-				+0.2
2,315,684	+				+0.2
2,315,724	+				-3.7
2,316,307	-		Pf6N2E2_1951	0.39	-0.8
2,316,411	-		Pf6N2E2_1951	0.48	+0.2
2,316,450	-		Pf6N2E2_1951	0.51	+0.2
2,316,463	-		Pf6N2E2_1951	0.52	+0.2
2,316,585	+		Pf6N2E2_1951	0.63	-1.4
2,316,647	-		Pf6N2E2_1951	0.68	+0.2
2,316,647	-		Pf6N2E2_1951	0.68	-0.8
2,316,647	-		Pf6N2E2_1951	0.68	+0.2
2,316,656	-		Pf6N2E2_1951	0.69	-0.9
2,316,692	-		Pf6N2E2_1951	0.72	-0.8
2,316,711	-		Pf6N2E2_1951	0.73	-0.7
2,316,711	-		Pf6N2E2_1951	0.73	-3.1
2,316,711	-		Pf6N2E2_1951	0.73	+0.2
2,316,711	-		Pf6N2E2_1951	0.73	-0.8
2,316,711	-		Pf6N2E2_1951	0.73	-0.8
2,316,711	-		Pf6N2E2_1951	0.73	+0.2
2,316,711	-		Pf6N2E2_1951	0.73	-0.8
2,316,711	-		Pf6N2E2_1951	0.73	+0.2
2,316,711	-		Pf6N2E2_1951	0.73	-0.8
2,316,712	+		Pf6N2E2_1951	0.74	-1.8
2,316,712	+		Pf6N2E2_1951	0.74	+0.2
2,316,713	-		Pf6N2E2_1951	0.74	+0.2
2,316,713	-		Pf6N2E2_1951	0.74	+0.2
2,316,788	+		Pf6N2E2_1951	0.80	+0.2
2,317,024	-				-0.8
2,317,024	-				-0.4
2,317,024	-				+0.2
2,317,076	+				+0.2
2,317,143	-				+0.2
2,317,154	+				+0.2
2,317,155	-				-0.1
2,317,155	-				+0.2
2,317,155	-				+0.2
2,317,155	-				+0.2
2,317,155	-				+0.2
2,317,155	-				+0.2
2,317,159	-				-0.8
2,317,159	-				-0.8
2,317,159	-				+0.8
2,317,159	-				-0.6
2,317,205	-		Pf6N2E2_1952	0.14	-1.8
2,317,205	-		Pf6N2E2_1952	0.14	+0.2
2,317,220	-		Pf6N2E2_1952	0.16	+0.2
2,317,251	-		Pf6N2E2_1952	0.19	+0.2
2,317,251	-		Pf6N2E2_1952	0.19	+0.2
2,317,251	-		Pf6N2E2_1952	0.19	-0.8
2,317,251	-		Pf6N2E2_1952	0.19	-0.8
2,317,334	-		Pf6N2E2_1952	0.29	+0.2
2,317,367	+		Pf6N2E2_1952	0.32	+0.2
2,317,367	+		Pf6N2E2_1952	0.32	+0.2
2,317,368	-		Pf6N2E2_1952	0.32	-0.8
2,317,368	-		Pf6N2E2_1952	0.32	+0.2
2,317,368	-		Pf6N2E2_1952	0.32	+0.2
2,317,454	+		Pf6N2E2_1952	0.42	-0.8
2,317,469	-		Pf6N2E2_1952	0.43	+0.2
2,317,522	+		Pf6N2E2_1952	0.49	+0.2
2,317,523	-		Pf6N2E2_1952	0.49	-0.9
2,317,579	-		Pf6N2E2_1952	0.56	-0.4
2,317,579	-		Pf6N2E2_1952	0.56	+0.2
2,317,579	-		Pf6N2E2_1952	0.56	+0.2
2,317,690	-		Pf6N2E2_1952	0.68	-1.4
2,317,717	-		Pf6N2E2_1952	0.71	-0.8
2,317,717	-		Pf6N2E2_1952	0.71	+0.0
2,317,717	-		Pf6N2E2_1952	0.71	-1.7
2,317,885	+		Pf6N2E2_1952	0.89	+0.2
2,317,885	+		Pf6N2E2_1952	0.89	-0.8
2,317,885	+		Pf6N2E2_1952	0.89	-0.8
2,317,885	+		Pf6N2E2_1952	0.89	-1.4
2,318,007	+				-0.8
2,318,007	+				+0.2
2,318,008	-				+0.2
2,318,008	-				+0.2