Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1554

Experiment: Ying_Nucleobase14 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 3
1,812,158	-				-0.4
1,812,158	-				+0.1
1,812,450	+		Pf6N2E2_1553	0.21	+0.1
1,812,450	+		Pf6N2E2_1553	0.21	+0.1
1,812,450	+		Pf6N2E2_1553	0.21	-1.4
1,812,450	+		Pf6N2E2_1553	0.21	+0.1
1,812,450	+		Pf6N2E2_1553	0.21	+0.1
1,812,450	+		Pf6N2E2_1553	0.21	+0.1
1,812,450	+		Pf6N2E2_1553	0.21	-0.9
1,812,451	-		Pf6N2E2_1553	0.21	+0.1
1,812,451	-		Pf6N2E2_1553	0.21	-0.9
1,812,451	-		Pf6N2E2_1553	0.21	+0.1
1,812,451	-		Pf6N2E2_1553	0.21	+0.1
1,812,451	-		Pf6N2E2_1553	0.21	+0.1
1,812,451	-				-0.4
1,812,706	-		Pf6N2E2_1553	0.62	+0.1
1,812,706	-		Pf6N2E2_1553	0.62	+0.1
1,812,845	+		Pf6N2E2_1553	0.84	+0.1
1,812,951	+				+0.1
1,812,951	+				+0.1
1,812,951	+				-1.4
1,812,952	-				-1.4
1,812,952	-				+0.1
1,812,952	-				+0.1
1,812,952	-				+0.1
1,812,952	-				+0.1
1,812,952	-				-0.9
1,812,952	-				-0.9
1,812,998	+				-0.9
1,813,039	+				+0.1
1,813,039	+				+0.1
1,813,040	-				-1.4
1,813,040	-				-0.9
1,813,040	-				+0.1
1,813,040	-				+0.1
1,813,040	-				+0.1
1,813,084	-				+0.1
1,813,093	+				-0.9
1,813,100	-				-0.9
1,813,536	+		Pf6N2E2_1554	0.20	+0.1
1,813,559	+		Pf6N2E2_1554	0.21	-0.9
1,813,559	+		Pf6N2E2_1554	0.21	+0.1
1,813,560	-		Pf6N2E2_1554	0.21	+0.1
1,813,560	-		Pf6N2E2_1554	0.21	+0.1
1,813,628	+		Pf6N2E2_1554	0.24	-1.3
1,813,628	+		Pf6N2E2_1554	0.24	-2.3
1,813,629	-		Pf6N2E2_1554	0.24	+0.1
1,813,684	+		Pf6N2E2_1554	0.27	-1.9
1,813,684	+		Pf6N2E2_1554	0.27	+0.1
1,813,685	-		Pf6N2E2_1554	0.27	+0.1
1,813,806	-		Pf6N2E2_1554	0.33	+0.1
1,813,806	-		Pf6N2E2_1554	0.33	-0.9
1,814,030	+		Pf6N2E2_1554	0.44	+0.1
1,814,030	+		Pf6N2E2_1554	0.44	+0.1
1,814,031	-		Pf6N2E2_1554	0.44	+0.1
1,814,616	-		Pf6N2E2_1554	0.72	+0.1
1,814,616	-		Pf6N2E2_1554	0.72	+0.1
1,814,616	-		Pf6N2E2_1554	0.72	+0.1
1,814,616	-		Pf6N2E2_1554	0.72	-1.9
1,814,616	-		Pf6N2E2_1554	0.72	-0.9
1,814,616	-		Pf6N2E2_1554	0.72	-0.7
1,814,616	-		Pf6N2E2_1554	0.72	+0.1
1,814,616	-		Pf6N2E2_1554	0.72	+0.1
1,814,616	-		Pf6N2E2_1554	0.72	-1.2
1,814,627	+		Pf6N2E2_1554	0.73	-1.4
1,814,628	-		Pf6N2E2_1554	0.73	-1.4
1,814,738	+		Pf6N2E2_1554	0.78	+0.1
1,814,739	-		Pf6N2E2_1554	0.78	+0.1
1,814,756	+		Pf6N2E2_1554	0.79	-0.1
1,814,803	+		Pf6N2E2_1554	0.81	-6.9
1,814,803	+		Pf6N2E2_1554	0.81	-0.1
1,814,804	-		Pf6N2E2_1554	0.81	+0.1
1,814,804	-		Pf6N2E2_1554	0.81	+0.1
1,814,804	-		Pf6N2E2_1554	0.81	+0.1
1,815,039	-				+0.1
1,815,039	-				-0.3
1,815,070	-				-0.9
1,815,192	-				-1.9
1,815,192	-				+0.1
1,815,315	+				-1.2
1,815,316	-				+0.1
1,816,014	+		Pf6N2E2_1555	0.39	-1.9
1,816,015	-		Pf6N2E2_1555	0.39	+0.1
1,816,015	-		Pf6N2E2_1555	0.39	-1.4
1,816,015	-		Pf6N2E2_1555	0.39	-0.9
1,816,015	-		Pf6N2E2_1555	0.39	-0.9
1,816,015	-		Pf6N2E2_1555	0.39	+0.1
1,816,015	-		Pf6N2E2_1555	0.39	-0.3
1,816,080	+		Pf6N2E2_1555	0.43	+0.1
1,816,080	+		Pf6N2E2_1555	0.43	+0.1
1,816,080	+		Pf6N2E2_1555	0.43	+0.1
1,816,081	-		Pf6N2E2_1555	0.43	-2.9
1,816,081	-		Pf6N2E2_1555	0.43	+0.1
1,816,081	-		Pf6N2E2_1555	0.43	+0.1