Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5914

Experiment: Ying_Nucleobase14 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 3
6,731,108	+				-0.7
6,731,109	-				+0.3
6,731,109	-				-0.7
6,731,242	+		Pf6N2E2_5912	0.26	-0.7
6,731,248	+		Pf6N2E2_5912	0.27	-0.7
6,731,248	+		Pf6N2E2_5912	0.27	+0.3
6,731,248	+		Pf6N2E2_5912	0.27	+0.3
6,731,248	+		Pf6N2E2_5912	0.27	-0.6
6,731,249	-		Pf6N2E2_5912	0.27	+0.0
6,731,249	-		Pf6N2E2_5912	0.27	+0.3
6,731,249	-		Pf6N2E2_5912	0.27	+0.3
6,731,249	-		Pf6N2E2_5912	0.27	+0.3
6,731,258	+		Pf6N2E2_5912	0.29	+0.3
6,731,258	+		Pf6N2E2_5912	0.29	+0.3
6,731,259	-		Pf6N2E2_5912	0.29	-1.3
6,731,310	+		Pf6N2E2_5912	0.40	+0.3
6,731,310	+		Pf6N2E2_5912	0.40	-0.8
6,731,311	-		Pf6N2E2_5912	0.40	+0.3
6,731,311	-		Pf6N2E2_5912	0.40	+0.3
6,731,374	+		Pf6N2E2_5912	0.53	-1.7
6,731,374	+		Pf6N2E2_5912	0.53	-0.7
6,731,375	-		Pf6N2E2_5912	0.53	-0.7
6,731,375	-		Pf6N2E2_5912	0.53	-2.1
6,731,479	+		Pf6N2E2_5912	0.75	-1.3
6,731,479	+		Pf6N2E2_5912	0.75	-0.6
6,731,480	-		Pf6N2E2_5912	0.75	-0.7
6,731,480	-		Pf6N2E2_5912	0.75	-0.1
6,731,480	-		Pf6N2E2_5912	0.75	-0.4
6,731,508	+		Pf6N2E2_5912	0.81	-0.4
6,731,625	+				+0.3
6,731,625	+				-1.3
6,731,626	-				-0.1
6,731,626	-				+0.3
6,731,626	-				-0.8
6,731,700	+		Pf6N2E2_5913	0.21	-1.3
6,731,700	+		Pf6N2E2_5913	0.21	+0.3
6,731,700	+		Pf6N2E2_5913	0.21	+0.3
6,731,701	-		Pf6N2E2_5913	0.21	-1.7
6,731,701	-		Pf6N2E2_5913	0.21	-0.7
6,731,701	-		Pf6N2E2_5913	0.21	+0.3
6,731,765	+		Pf6N2E2_5913	0.34	+0.3
6,731,766	-		Pf6N2E2_5913	0.34	-1.6
6,731,871	+		Pf6N2E2_5913	0.55	-1.3
6,731,872	-		Pf6N2E2_5913	0.55	-0.7
6,731,872	-		Pf6N2E2_5913	0.55	-0.7
6,731,947	-		Pf6N2E2_5913	0.71	-0.7
6,732,011	+		Pf6N2E2_5913	0.83	+0.3
6,732,012	-		Pf6N2E2_5913	0.84	+0.3
6,732,095	-				+0.3
6,732,202	+				-1.3
6,732,202	+				-2.0
6,732,203	-				+0.3
6,732,203	-				+0.3
6,732,261	-		Pf6N2E2_5914	0.14	-0.8
6,732,616	+		Pf6N2E2_5914	0.43	+0.9
6,732,616	+		Pf6N2E2_5914	0.43	+0.3
6,732,617	-		Pf6N2E2_5914	0.43	+0.3
6,732,662	+		Pf6N2E2_5914	0.47	-0.8
6,732,663	-		Pf6N2E2_5914	0.47	+0.3
6,732,663	-		Pf6N2E2_5914	0.47	-0.7
6,732,673	-		Pf6N2E2_5914	0.48	-1.5
6,732,857	-		Pf6N2E2_5914	0.63	-1.7
6,732,857	-		Pf6N2E2_5914	0.63	-0.7
6,732,863	+		Pf6N2E2_5914	0.64	+0.3
6,732,863	+		Pf6N2E2_5914	0.64	-0.7
6,732,863	+		Pf6N2E2_5914	0.64	+0.3
6,732,863	+		Pf6N2E2_5914	0.64	+0.3
6,732,864	-		Pf6N2E2_5914	0.64	+0.3
6,732,864	-		Pf6N2E2_5914	0.64	-0.7
6,732,941	+		Pf6N2E2_5914	0.70	-0.3
6,732,941	+		Pf6N2E2_5914	0.70	-1.3
6,732,942	-		Pf6N2E2_5914	0.70	-1.0
6,732,942	-		Pf6N2E2_5914	0.70	-0.7
6,733,274	-				-0.7
6,733,448	+				-1.3
6,733,448	+				-0.7
6,733,448	+				-0.4
6,733,503	-		Pf6N2E2_5915	0.13	-0.7
6,733,708	+		Pf6N2E2_5915	0.28	+0.3
6,733,709	-		Pf6N2E2_5915	0.28	-0.7
6,733,709	-		Pf6N2E2_5915	0.28	+0.3
6,733,709	-		Pf6N2E2_5915	0.28	-0.8
6,733,748	+		Pf6N2E2_5915	0.30	-0.9
6,734,196	+		Pf6N2E2_5915	0.61	+0.3
6,734,197	-		Pf6N2E2_5915	0.61	+0.3
6,734,197	-		Pf6N2E2_5915	0.61	+0.7
6,734,197	-		Pf6N2E2_5915	0.61	+0.3
6,734,267	-		Pf6N2E2_5915	0.66	+0.3