Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3922

Experiment: Ying_Nucleobase14 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 3
4,557,926	+				-0.2
4,557,926	+				+0.4
4,558,039	+				-1.2
4,558,040	-				-2.6
4,558,078	+				-1.2
4,558,079	-				+0.4
4,558,079	-				+0.4
4,558,079	-				-0.9
4,558,088	-				-0.6
4,558,131	+				+0.4
4,558,132	-				+0.4
4,558,132	-				-0.3
4,558,197	-				-1.2
4,558,197	-				+0.4
4,558,199	+				+0.4
4,558,200	-				+0.4
4,558,200	-				-0.6
4,558,213	-				+0.4
4,558,218	-				+0.4
4,558,244	-				-2.6
4,558,246	+				+0.4
4,558,261	-				+0.4
4,558,276	-				-1.6
4,558,291	-				-1.9
4,558,315	-				-1.2
4,558,353	-				+0.4
4,558,452	+				+0.4
4,558,452	+				+0.4
4,558,452	+				+0.4
4,558,452	+				-1.2
4,558,453	-				+0.1
4,558,453	-				+0.1
4,558,453	-				+0.0
4,558,453	-				+0.4
4,558,453	-				-1.2
4,558,453	-				-1.9
4,558,453	-				-1.2
4,558,504	-				+0.4
4,558,515	+				-0.6
4,558,606	+		Pf6N2E2_3922	0.21	+0.4
4,558,606	+		Pf6N2E2_3922	0.21	-0.9
4,558,606	+		Pf6N2E2_3922	0.21	+1.0
4,558,607	-		Pf6N2E2_3922	0.21	-0.6
4,558,607	-		Pf6N2E2_3922	0.21	-1.2
4,558,607	-		Pf6N2E2_3922	0.21	-1.9
4,558,607	-		Pf6N2E2_3922	0.21	+0.4
4,558,849	-		Pf6N2E2_3922	0.53	-0.6
4,558,912	+		Pf6N2E2_3922	0.61	-0.6
4,558,912	+		Pf6N2E2_3922	0.61	-0.9
4,558,973	+		Pf6N2E2_3922	0.69	-0.6
4,558,973	+		Pf6N2E2_3922	0.69	-0.2
4,558,973	+		Pf6N2E2_3922	0.69	-0.4
4,558,973	+		Pf6N2E2_3922	0.69	-0.6
4,558,973	+		Pf6N2E2_3922	0.69	+1.4
4,558,974	-		Pf6N2E2_3922	0.69	+0.4
4,558,974	-		Pf6N2E2_3922	0.69	+0.7
4,558,974	-		Pf6N2E2_3922	0.69	+0.4
4,559,074	+		Pf6N2E2_3922	0.82	+0.2
4,559,075	-		Pf6N2E2_3922	0.82	-0.1
4,559,075	-		Pf6N2E2_3922	0.82	-0.1
4,559,152	+				-0.9
4,559,153	-				-1.2
4,559,153	-				-1.2
4,559,215	+				+0.4
4,559,216	-				+0.4
4,559,216	-				-1.6
4,559,216	-				+0.4
4,559,216	-				+0.4
4,559,216	-				-1.6
4,559,405	-				+0.4
4,559,406	+				+0.1
4,559,406	+				-0.4
4,559,406	+				+0.4
4,559,407	-				+0.4
4,559,449	+				+0.4
4,559,450	-				-0.7
4,559,514	+				+0.4
4,559,515	-				+0.4
4,559,550	+				-0.6
4,559,550	+				+0.4
4,559,550	+				-0.9
4,559,551	-				-0.2
4,559,551	-				-2.1
4,559,551	-				-0.6
4,559,781	-		Pf6N2E2_3923	0.18	-1.2
4,559,995	+		Pf6N2E2_3923	0.36	-0.6