Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3850

Experiment: Ying_Nucleobase14 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 3
4,481,221	+		Pf6N2E2_3848	0.16	-0.6
4,481,222	-		Pf6N2E2_3848	0.16	-1.2
4,481,222	-		Pf6N2E2_3848	0.16	-0.6
4,481,252	+		Pf6N2E2_3848	0.25	-0.0
4,481,300	+		Pf6N2E2_3848	0.40	-1.6
4,481,300	+		Pf6N2E2_3848	0.40	-1.2
4,481,300	+		Pf6N2E2_3848	0.40	-1.2
4,481,301	-		Pf6N2E2_3848	0.40	+0.4
4,481,302	+		Pf6N2E2_3848	0.41	-0.6
4,481,302	+		Pf6N2E2_3848	0.41	-0.6
4,481,302	+		Pf6N2E2_3848	0.41	+0.4
4,481,303	-		Pf6N2E2_3848	0.41	-0.8
4,481,303	-		Pf6N2E2_3848	0.41	+0.4
4,481,303	-		Pf6N2E2_3848	0.41	-0.8
4,481,303	-		Pf6N2E2_3848	0.41	+0.4
4,481,375	-		Pf6N2E2_3848	0.63	+0.4
4,481,423	+		Pf6N2E2_3848	0.77	+0.4
4,481,424	-		Pf6N2E2_3848	0.78	+0.4
4,481,430	+		Pf6N2E2_3848	0.79	-0.3
4,481,430	+		Pf6N2E2_3848	0.79	-0.6
4,481,430	+		Pf6N2E2_3848	0.79	-0.6
4,481,431	-		Pf6N2E2_3848	0.80	-0.6
4,481,431	-		Pf6N2E2_3848	0.80	+0.4
4,481,431	-		Pf6N2E2_3848	0.80	+0.4
4,481,487	+				+0.4
4,481,487	+				+0.4
4,481,488	-				-1.2
4,481,524	+				-0.8
4,481,524	+				-1.6
4,481,524	+				+0.4
4,481,525	-				+0.4
4,481,529	+				-0.5
4,481,529	+				-1.3
4,481,529	+				+0.4
4,481,529	+				-1.2
4,481,530	-				-1.6
4,481,530	-				-0.7
4,481,530	-				-0.6
4,481,530	-				+0.4
4,481,539	+				-1.2
4,481,834	+		Pf6N2E2_3849	0.67	+0.4
4,481,925	+		Pf6N2E2_3849	0.90	-0.7
4,481,925	+		Pf6N2E2_3849	0.90	+0.4
4,481,926	-				+0.4
4,482,036	+				+1.0
4,482,036	+				+0.4
4,482,036	+				-0.6
4,482,058	+				-0.6
4,482,058	+				-0.1
4,482,058	+				-0.6
4,482,059	-				+0.4
4,482,059	-				+0.4
4,482,096	+				+0.4
4,482,097	-				+0.4
4,482,333	+		Pf6N2E2_3850	0.14	-1.4
4,482,333	+		Pf6N2E2_3850	0.14	+0.4
4,482,333	+		Pf6N2E2_3850	0.14	-0.0
4,482,333	+		Pf6N2E2_3850	0.14	-0.6
4,482,333	+		Pf6N2E2_3850	0.14	+0.4
4,482,333	+		Pf6N2E2_3850	0.14	+0.2
4,482,333	+		Pf6N2E2_3850	0.14	+0.4
4,482,333	+		Pf6N2E2_3850	0.14	+0.4
4,482,333	+		Pf6N2E2_3850	0.14	+0.4
4,482,333	+		Pf6N2E2_3850	0.14	+0.4
4,482,333	+		Pf6N2E2_3850	0.14	-1.2
4,482,334	-		Pf6N2E2_3850	0.14	-0.6
4,482,334	-		Pf6N2E2_3850	0.14	-1.6
4,482,334	-		Pf6N2E2_3850	0.14	-1.2
4,482,334	-		Pf6N2E2_3850	0.14	-0.6
4,482,334	-		Pf6N2E2_3850	0.14	-1.2
4,482,334	-		Pf6N2E2_3850	0.14	+0.4
4,482,334	-		Pf6N2E2_3850	0.14	-0.6
4,482,334	-		Pf6N2E2_3850	0.14	-0.6
4,482,334	-		Pf6N2E2_3850	0.14	-0.6
4,482,373	+		Pf6N2E2_3850	0.17	-0.6
4,482,469	+		Pf6N2E2_3850	0.27	-0.6
4,482,469	+		Pf6N2E2_3850	0.27	-0.6
4,482,470	-		Pf6N2E2_3850	0.27	-0.2
4,482,568	+		Pf6N2E2_3850	0.36	+0.4
4,482,568	+		Pf6N2E2_3850	0.36	+0.4
4,482,568	+		Pf6N2E2_3850	0.36	-0.8
4,482,568	+		Pf6N2E2_3850	0.36	-1.2
4,482,568	+		Pf6N2E2_3850	0.36	-0.2
4,482,568	+		Pf6N2E2_3850	0.36	-0.3
4,482,568	+		Pf6N2E2_3850	0.36	+0.4
4,482,568	+		Pf6N2E2_3850	0.36	+0.4
4,482,568	+		Pf6N2E2_3850	0.36	-0.6
4,482,569	-		Pf6N2E2_3850	0.36	+0.4
4,482,569	-		Pf6N2E2_3850	0.36	-0.6
4,482,569	-		Pf6N2E2_3850	0.36	-0.6
4,482,569	-		Pf6N2E2_3850	0.36	-0.3
4,482,569	-		Pf6N2E2_3850	0.36	-0.6
4,482,569	-		Pf6N2E2_3850	0.36	+0.4
4,482,569	-		Pf6N2E2_3850	0.36	+0.4
4,482,634	+		Pf6N2E2_3850	0.42	-0.6
4,482,634	+		Pf6N2E2_3850	0.42	-0.6
4,482,634	+		Pf6N2E2_3850	0.42	+0.1
4,482,634	+		Pf6N2E2_3850	0.42	-0.6
4,482,634	+		Pf6N2E2_3850	0.42	-0.3
4,482,635	-		Pf6N2E2_3850	0.42	-0.6
4,482,635	-		Pf6N2E2_3850	0.42	-1.6
4,482,635	-		Pf6N2E2_3850	0.42	-0.6
4,482,637	+		Pf6N2E2_3850	0.43	-0.4
4,482,637	+		Pf6N2E2_3850	0.43	-0.5
4,482,638	-		Pf6N2E2_3850	0.43	-1.9
4,482,821	+		Pf6N2E2_3850	0.60	-0.3
4,482,821	+		Pf6N2E2_3850	0.60	+0.4
4,482,822	-		Pf6N2E2_3850	0.60	+0.4
4,482,922	+		Pf6N2E2_3850	0.70	-0.1
4,482,922	+		Pf6N2E2_3850	0.70	-0.9
4,482,922	+		Pf6N2E2_3850	0.70	+0.4
4,482,922	+		Pf6N2E2_3850	0.70	-0.2
4,482,922	+		Pf6N2E2_3850	0.70	-0.6
4,482,923	-		Pf6N2E2_3850	0.70	+0.4
4,482,923	-		Pf6N2E2_3850	0.70	+0.4
4,482,928	+		Pf6N2E2_3850	0.70	+0.4
4,482,928	+		Pf6N2E2_3850	0.70	-0.8
4,482,928	+		Pf6N2E2_3850	0.70	+0.3
4,482,928	+		Pf6N2E2_3850	0.70	-0.0
4,482,928	+		Pf6N2E2_3850	0.70	+1.1
4,482,928	+		Pf6N2E2_3850	0.70	+0.1
4,482,928	+		Pf6N2E2_3850	0.70	+0.4
4,482,928	+		Pf6N2E2_3850	0.70	-0.1
4,482,929	-		Pf6N2E2_3850	0.70	-0.4
4,482,929	-		Pf6N2E2_3850	0.70	-0.6
4,482,929	-				+0.4
4,482,947	+		Pf6N2E2_3850	0.72	+0.4
4,482,979	+		Pf6N2E2_3850	0.75	-0.0
4,482,980	-		Pf6N2E2_3850	0.75	-0.6
4,482,980	-		Pf6N2E2_3850	0.75	+0.4
4,483,006	+		Pf6N2E2_3850	0.78	-0.7
4,483,006	+		Pf6N2E2_3850	0.78	-0.5
4,483,006	+		Pf6N2E2_3850	0.78	-0.6
4,483,006	+		Pf6N2E2_3850	0.78	+0.4
4,483,006	+		Pf6N2E2_3850	0.78	+0.4
4,483,006	+		Pf6N2E2_3850	0.78	+0.1
4,483,006	+		Pf6N2E2_3850	0.78	-0.6
4,483,006	+		Pf6N2E2_3850	0.78	+0.1
4,483,006	+		Pf6N2E2_3850	0.78	+0.6
4,483,006	+		Pf6N2E2_3850	0.78	-0.8
4,483,006	+		Pf6N2E2_3850	0.78	+0.2
4,483,006	+		Pf6N2E2_3850	0.78	-0.2
4,483,006	+		Pf6N2E2_3850	0.78	-1.7
4,483,006	+		Pf6N2E2_3850	0.78	+1.0
4,483,006	+		Pf6N2E2_3850	0.78	+0.1
4,483,006	+		Pf6N2E2_3850	0.78	-0.2
4,483,006	+		Pf6N2E2_3850	0.78	+0.3
4,483,006	+		Pf6N2E2_3850	0.78	+0.4
4,483,006	+		Pf6N2E2_3850	0.78	+0.2
4,483,006	+		Pf6N2E2_3850	0.78	+1.4
4,483,006	+		Pf6N2E2_3850	0.78	-0.6
4,483,006	+		Pf6N2E2_3850	0.78	-0.3
4,483,006	+		Pf6N2E2_3850	0.78	+0.1
4,483,006	+		Pf6N2E2_3850	0.78	-0.2
4,483,006	+		Pf6N2E2_3850	0.78	+0.0
4,483,006	+		Pf6N2E2_3850	0.78	+0.6
4,483,006	+		Pf6N2E2_3850	0.78	+0.1
4,483,007	-		Pf6N2E2_3850	0.78	+0.4
4,483,007	-		Pf6N2E2_3850	0.78	-1.4
4,483,007	-		Pf6N2E2_3850	0.78	+0.4
4,483,007	-		Pf6N2E2_3850	0.78	-1.6
4,483,007	-		Pf6N2E2_3850	0.78	+0.4
4,483,007	-		Pf6N2E2_3850	0.78	-0.6
4,483,007	-		Pf6N2E2_3850	0.78	+0.4
4,483,007	-		Pf6N2E2_3850	0.78	+0.4
4,483,007	-		Pf6N2E2_3850	0.78	+0.5
4,483,007	-		Pf6N2E2_3850	0.78	-0.7
4,483,007	-		Pf6N2E2_3850	0.78	-0.8
4,483,007	-		Pf6N2E2_3850	0.78	-0.6
4,483,007	-		Pf6N2E2_3850	0.78	-0.6
4,483,007	-		Pf6N2E2_3850	0.78	+0.4
4,483,007	-		Pf6N2E2_3850	0.78	-0.1
4,483,007	-		Pf6N2E2_3850	0.78	+0.4
4,483,007	-		Pf6N2E2_3850	0.78	+0.4
4,483,007	-		Pf6N2E2_3850	0.78	-0.6
4,483,007	-		Pf6N2E2_3850	0.78	-0.6
4,483,007	-		Pf6N2E2_3850	0.78	-1.6
4,483,007	-		Pf6N2E2_3850	0.78	-1.2
4,483,007	-		Pf6N2E2_3850	0.78	+0.4
4,483,007	-		Pf6N2E2_3850	0.78	+0.4
4,483,007	-		Pf6N2E2_3850	0.78	-0.3
4,483,007	-		Pf6N2E2_3850	0.78	-0.9
4,483,007	-		Pf6N2E2_3850	0.78	-0.6
4,483,007	-		Pf6N2E2_3850	0.78	-1.2
4,483,007	-		Pf6N2E2_3850	0.78	+0.4
4,483,019	-		Pf6N2E2_3850	0.79	-0.6
4,483,109	+		Pf6N2E2_3850	0.88	-1.2
4,483,109	+		Pf6N2E2_3850	0.88	+0.2
4,483,109	+		Pf6N2E2_3850	0.88	+0.0
4,483,109	+		Pf6N2E2_3850	0.88	-0.0
4,483,144	+				-0.4
4,483,179	+				+1.4
4,483,179	+				+0.1
4,483,179	+				-0.1
4,483,180	-				+0.4
4,483,180	-				-0.6
4,483,286	+				+0.4
4,483,287	-				-0.6
4,483,287	-				-1.7
4,483,287	-				-0.6
4,483,294	-				-1.6
4,483,331	+				+0.4
4,483,357	+				-0.1
4,483,358	-				+0.4
4,483,460	-		Pf6N2E2_3851	0.20	-0.6
4,483,480	+		Pf6N2E2_3851	0.23	-1.2
4,483,483	+		Pf6N2E2_3851	0.24	+0.4
4,483,483	+		Pf6N2E2_3851	0.24	+0.4
4,483,484	-		Pf6N2E2_3851	0.24	-1.2
4,483,484	-		Pf6N2E2_3851	0.24	+0.4
4,483,492	+		Pf6N2E2_3851	0.25	+0.4
4,483,493	-		Pf6N2E2_3851	0.25	-1.2
4,483,493	-		Pf6N2E2_3851	0.25	+0.4
4,483,493	-		Pf6N2E2_3851	0.25	-1.2
4,483,520	+		Pf6N2E2_3851	0.30	-0.6
4,483,520	+		Pf6N2E2_3851	0.30	+0.8
4,483,520	+		Pf6N2E2_3851	0.30	-0.9
4,483,521	-		Pf6N2E2_3851	0.30	-0.6
4,483,521	-		Pf6N2E2_3851	0.30	+0.4
4,483,521	-		Pf6N2E2_3851	0.30	+0.4
4,483,521	-		Pf6N2E2_3851	0.30	-1.6
4,483,521	-		Pf6N2E2_3851	0.30	-0.6
4,483,521	-		Pf6N2E2_3851	0.30	-0.6
4,483,521	-		Pf6N2E2_3851	0.30	-0.6
4,483,632	+		Pf6N2E2_3851	0.48	+0.4
4,483,633	-		Pf6N2E2_3851	0.49	+0.4
4,483,682	+		Pf6N2E2_3851	0.57	-0.2
4,483,687	+		Pf6N2E2_3851	0.57	-1.9
4,483,687	+		Pf6N2E2_3851	0.57	-0.6
4,483,687	+		Pf6N2E2_3851	0.57	-0.3
4,483,687	+		Pf6N2E2_3851	0.57	-0.6
4,483,687	+		Pf6N2E2_3851	0.57	+0.4
4,483,687	+		Pf6N2E2_3851	0.57	-0.4
4,483,687	+		Pf6N2E2_3851	0.57	-0.6
4,483,687	+		Pf6N2E2_3851	0.57	-0.6
4,483,687	+		Pf6N2E2_3851	0.57	-0.4
4,483,687	+		Pf6N2E2_3851	0.57	-0.6
4,483,687	+		Pf6N2E2_3851	0.57	-0.8
4,483,687	+		Pf6N2E2_3851	0.57	-0.3
4,483,687	+		Pf6N2E2_3851	0.57	-0.5
4,483,687	+		Pf6N2E2_3851	0.57	+0.4
4,483,687	+		Pf6N2E2_3851	0.57	-1.2
4,483,687	+		Pf6N2E2_3851	0.57	+1.1
4,483,687	+		Pf6N2E2_3851	0.57	-1.2
4,483,687	+		Pf6N2E2_3851	0.57	+0.4
4,483,687	+		Pf6N2E2_3851	0.57	-1.2
4,483,687	+		Pf6N2E2_3851	0.57	-0.1
4,483,687	+		Pf6N2E2_3851	0.57	-0.6
4,483,687	+		Pf6N2E2_3851	0.57	-0.3
4,483,687	+		Pf6N2E2_3851	0.57	-0.0
4,483,687	+		Pf6N2E2_3851	0.57	-0.6
4,483,687	+		Pf6N2E2_3851	0.57	-0.4
4,483,687	+		Pf6N2E2_3851	0.57	-1.6
4,483,688	-		Pf6N2E2_3851	0.58	+0.4
4,483,688	-		Pf6N2E2_3851	0.58	-0.6
4,483,688	-		Pf6N2E2_3851	0.58	-0.6
4,483,688	-		Pf6N2E2_3851	0.58	-0.6
4,483,688	-		Pf6N2E2_3851	0.58	-0.6
4,483,688	-		Pf6N2E2_3851	0.58	+0.4
4,483,688	-		Pf6N2E2_3851	0.58	+0.4
4,483,688	-		Pf6N2E2_3851	0.58	+0.4
4,483,688	-		Pf6N2E2_3851	0.58	+0.4
4,483,688	-		Pf6N2E2_3851	0.58	-0.6
4,483,688	-		Pf6N2E2_3851	0.58	-0.6
4,483,688	-		Pf6N2E2_3851	0.58	-1.9
4,483,688	-		Pf6N2E2_3851	0.58	-1.6
4,483,688	-		Pf6N2E2_3851	0.58	+0.4
4,483,688	-		Pf6N2E2_3851	0.58	+0.4
4,483,789	+		Pf6N2E2_3851	0.74	-0.2
4,483,789	+		Pf6N2E2_3851	0.74	+0.4
4,483,789	+		Pf6N2E2_3851	0.74	+0.8
4,483,789	+		Pf6N2E2_3851	0.74	-1.6
4,483,789	+		Pf6N2E2_3851	0.74	-1.2
4,483,790	-		Pf6N2E2_3851	0.74	+0.4
4,483,790	-		Pf6N2E2_3851	0.74	+0.4
4,483,801	-		Pf6N2E2_3851	0.76	-0.6
4,483,831	+		Pf6N2E2_3851	0.81	-1.6
4,483,831	+		Pf6N2E2_3851	0.81	-0.6
4,483,832	-		Pf6N2E2_3851	0.81	+0.4
4,483,934	+				+0.4
4,483,934	+				+0.4
4,483,935	-				+0.4
4,483,940	+				-0.7
4,483,940	+				-0.6
4,483,940	+				-0.6
4,483,941	-				-0.6
4,483,941	-				-0.6
4,483,941	-				-1.0