Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1736

Experiment: Ying_Nucleobase14 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 3
2,047,324	+		Pf6N2E2_1734	0.83	-0.8
2,047,332	+		Pf6N2E2_1734	0.85	+0.8
2,047,333	-		Pf6N2E2_1734	0.85	-0.6
2,047,333	-		Pf6N2E2_1734	0.85	+1.5
2,047,335	-		Pf6N2E2_1734	0.86	-1.4
2,047,335	-		Pf6N2E2_1734	0.86	-0.8
2,047,360	-				+0.2
2,047,377	-				-0.8
2,047,395	+				+0.2
2,047,396	-				+0.2
2,047,437	+				+0.2
2,047,753	+		Pf6N2E2_1735	0.79	-0.6
2,047,754	-		Pf6N2E2_1735	0.79	-0.8
2,047,754	-		Pf6N2E2_1735	0.79	+1.8
2,047,898	+				+0.2
2,047,939	+				+0.2
2,047,945	+				-0.7
2,047,946	-				-1.4
2,047,946	-				+0.2
2,048,022	+				+0.2
2,048,022	+				-1.2
2,048,023	-				-0.5
2,048,099	-				+0.2
2,048,139	-				-0.8
2,048,250	+				+0.2
2,048,250	+				+0.2
2,048,251	-				+0.2
2,048,265	+				+0.2
2,048,266	-				-1.4
2,048,266	-				-1.4
2,048,266	-				-1.4
2,048,267	+				-2.4
2,048,268	-				-0.6
2,048,268	-				+0.4
2,048,376	+		Pf6N2E2_1736	0.17	-2.2
2,048,464	+		Pf6N2E2_1736	0.24	-1.4
2,048,464	+		Pf6N2E2_1736	0.24	-0.9
2,048,464	+		Pf6N2E2_1736	0.24	+0.2
2,048,464	+		Pf6N2E2_1736	0.24	-1.0
2,048,475	+		Pf6N2E2_1736	0.24	-0.6
2,048,475	+		Pf6N2E2_1736	0.24	-0.8
2,048,475	+		Pf6N2E2_1736	0.24	-1.4
2,048,475	+		Pf6N2E2_1736	0.24	-1.1
2,048,475	+		Pf6N2E2_1736	0.24	+0.2
2,048,476	-		Pf6N2E2_1736	0.25	+0.2
2,048,553	+		Pf6N2E2_1736	0.31	-0.9
2,048,554	-		Pf6N2E2_1736	0.31	-1.5
2,048,589	+		Pf6N2E2_1736	0.34	+0.2
2,048,913	+		Pf6N2E2_1736	0.59	+0.2
2,048,997	+		Pf6N2E2_1736	0.66	-0.8
2,048,998	-		Pf6N2E2_1736	0.66	-2.4
2,049,256	-		Pf6N2E2_1736	0.87	-2.6
2,049,256	-		Pf6N2E2_1736	0.87	+0.2
2,049,286	+		Pf6N2E2_1736	0.89	+0.2
2,049,376	-				+0.2
2,049,462	+				-0.8
2,049,463	-				+0.2
2,049,504	-				+0.2
2,049,554	-				-0.8
2,049,554	-				-0.8
2,049,581	-				-0.8
2,049,591	+				+0.2
2,049,592	-				-0.2
2,049,883	+		Pf6N2E2_1737	0.21	+0.2
2,049,883	+		Pf6N2E2_1737	0.21	+0.2
2,049,883	+		Pf6N2E2_1737	0.21	+0.2
2,049,883	+		Pf6N2E2_1737	0.21	+0.2
2,049,884	-		Pf6N2E2_1737	0.21	+0.2
2,049,884	-		Pf6N2E2_1737	0.21	+0.2
2,049,884	-		Pf6N2E2_1737	0.21	+0.2
2,049,884	-		Pf6N2E2_1737	0.21	-0.7
2,049,885	+		Pf6N2E2_1737	0.21	-0.6
2,049,936	+		Pf6N2E2_1737	0.29	+0.2
2,050,037	+		Pf6N2E2_1737	0.45	-0.6
2,050,037	+		Pf6N2E2_1737	0.45	-0.8
2,050,037	+		Pf6N2E2_1737	0.45	+0.2
2,050,171	+		Pf6N2E2_1737	0.66	-1.4
2,050,171	+		Pf6N2E2_1737	0.66	+0.2
2,050,215	+		Pf6N2E2_1737	0.73	-0.5