Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5799

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
6,616,155	+				-3.8
6,616,155	+				-3.2
6,616,156	-				-0.3
6,616,178	+				-2.3
6,616,276	+				+0.3
6,616,283	+				+0.3
6,616,284	-				+0.3
6,616,284	-				+1.8
6,616,696	+		Pf6N2E2_5799	0.42	-0.7
6,616,696	+		Pf6N2E2_5799	0.42	-0.7
6,616,696	+		Pf6N2E2_5799	0.42	+0.3
6,616,697	-		Pf6N2E2_5799	0.42	+0.3
6,616,697	-		Pf6N2E2_5799	0.42	+0.0
6,616,697	-		Pf6N2E2_5799	0.42	+0.7
6,616,697	-		Pf6N2E2_5799	0.42	+0.3
6,616,697	-		Pf6N2E2_5799	0.42	-0.7
6,616,697	-		Pf6N2E2_5799	0.42	+0.3
6,616,740	+		Pf6N2E2_5799	0.45	-1.7
6,616,740	+		Pf6N2E2_5799	0.45	+0.4
6,616,740	+		Pf6N2E2_5799	0.45	-1.3
6,616,740	+		Pf6N2E2_5799	0.45	+0.3
6,616,741	-		Pf6N2E2_5799	0.45	+0.3
6,616,741	-		Pf6N2E2_5799	0.45	+0.3
6,616,741	-		Pf6N2E2_5799	0.45	-1.3
6,616,967	-		Pf6N2E2_5799	0.65	+0.3
6,617,007	+		Pf6N2E2_5799	0.68	+0.3
6,617,008	-		Pf6N2E2_5799	0.69	+0.4
6,617,142	-		Pf6N2E2_5799	0.80	+0.3
6,617,266	+				-1.7
6,617,266	+				+0.3
6,617,267	-				+0.3
6,617,267	-				-0.2
6,617,267	-				-0.7
6,617,288	-				+0.3
6,617,288	-				-1.7
6,617,503	+				+0.3
6,617,512	+				+0.3
6,617,512	+				-0.9
6,617,512	+				-0.4
6,617,513	-				+0.3
6,617,531	+				-0.7
6,617,575	+				+0.3
6,617,576	-				+0.3
6,617,590	+		Pf6N2E2_5800	0.11	-1.7
6,617,590	+		Pf6N2E2_5800	0.11	-0.8
6,617,596	+		Pf6N2E2_5800	0.12	+0.3
6,617,596	+		Pf6N2E2_5800	0.12	-0.7
6,617,596	+		Pf6N2E2_5800	0.12	+0.3
6,617,611	+		Pf6N2E2_5800	0.14	+0.3
6,617,611	+		Pf6N2E2_5800	0.14	-1.2
6,617,611	+		Pf6N2E2_5800	0.14	+0.3
6,617,611	+		Pf6N2E2_5800	0.14	+0.8
6,617,611	+		Pf6N2E2_5800	0.14	+0.3
6,617,611	+		Pf6N2E2_5800	0.14	+0.3
6,617,611	+		Pf6N2E2_5800	0.14	+0.3
6,617,611	+		Pf6N2E2_5800	0.14	-0.2
6,617,611	+		Pf6N2E2_5800	0.14	+0.3
6,617,611	+		Pf6N2E2_5800	0.14	-1.3
6,617,611	+		Pf6N2E2_5800	0.14	+0.3
6,617,612	-		Pf6N2E2_5800	0.14	+0.3
6,617,612	-		Pf6N2E2_5800	0.14	-1.3
6,617,612	-		Pf6N2E2_5800	0.14	-1.3
6,617,612	-		Pf6N2E2_5800	0.14	+0.3
6,617,612	-		Pf6N2E2_5800	0.14	-0.7
6,617,612	-		Pf6N2E2_5800	0.14	-0.3
6,617,612	-		Pf6N2E2_5800	0.14	+0.3
6,617,612	-		Pf6N2E2_5800	0.14	-0.7
6,617,612	-		Pf6N2E2_5800	0.14	-0.7
6,617,653	+		Pf6N2E2_5800	0.19	+0.3
6,617,653	+		Pf6N2E2_5800	0.19	-0.7
6,617,653	+		Pf6N2E2_5800	0.19	+0.3
6,617,653	+		Pf6N2E2_5800	0.19	+0.3
6,617,654	-		Pf6N2E2_5800	0.19	-1.3
6,617,654	-		Pf6N2E2_5800	0.19	-1.0
6,617,654	-		Pf6N2E2_5800	0.19	-0.6
6,617,654	-		Pf6N2E2_5800	0.19	+0.3
6,617,654	-		Pf6N2E2_5800	0.19	+0.5
6,617,654	-		Pf6N2E2_5800	0.19	-0.7
6,617,689	+		Pf6N2E2_5800	0.24	-1.0
6,617,690	-		Pf6N2E2_5800	0.24	+0.3
6,617,690	-		Pf6N2E2_5800	0.24	-0.7
6,617,690	-		Pf6N2E2_5800	0.24	-1.3
6,617,690	-		Pf6N2E2_5800	0.24	+0.3
6,617,690	-		Pf6N2E2_5800	0.24	-1.7
6,617,690	-		Pf6N2E2_5800	0.24	+0.3
6,617,690	-		Pf6N2E2_5800	0.24	+0.3
6,617,776	+		Pf6N2E2_5800	0.35	+0.3
6,617,776	+		Pf6N2E2_5800	0.35	-0.7
6,617,777	-		Pf6N2E2_5800	0.35	+0.3
6,617,777	-		Pf6N2E2_5800	0.35	-1.0
6,617,777	-		Pf6N2E2_5800	0.35	-0.4
6,617,777	-		Pf6N2E2_5800	0.35	+0.3
6,617,777	-		Pf6N2E2_5800	0.35	+0.3
6,617,777	-		Pf6N2E2_5800	0.35	-0.7
6,617,861	-		Pf6N2E2_5800	0.46	-1.3
6,617,905	+		Pf6N2E2_5800	0.51	-0.7
6,617,906	-		Pf6N2E2_5800	0.51	+0.3
6,617,935	+		Pf6N2E2_5800	0.55	-1.7
6,617,935	+		Pf6N2E2_5800	0.55	-0.4
6,617,936	-		Pf6N2E2_5800	0.55	+0.3
6,617,936	-		Pf6N2E2_5800	0.55	+0.3
6,617,936	-		Pf6N2E2_5800	0.55	+0.3
6,618,028	+		Pf6N2E2_5800	0.67	-0.7
6,618,029	-		Pf6N2E2_5800	0.67	+0.3
6,618,029	-		Pf6N2E2_5800	0.67	-1.0
6,618,029	-		Pf6N2E2_5800	0.67	-1.3
6,618,031	+		Pf6N2E2_5800	0.67	+1.3
6,618,031	+		Pf6N2E2_5800	0.67	-0.7
6,618,031	+		Pf6N2E2_5800	0.67	+0.3
6,618,031	+		Pf6N2E2_5800	0.67	-0.4
6,618,032	-		Pf6N2E2_5800	0.67	+0.3
6,618,032	-		Pf6N2E2_5800	0.67	+0.3
6,618,032	-		Pf6N2E2_5800	0.67	+0.3
6,618,070	+		Pf6N2E2_5800	0.72	+0.3
6,618,071	-		Pf6N2E2_5800	0.72	+0.3
6,618,106	+		Pf6N2E2_5800	0.77	+0.3
6,618,185	-		Pf6N2E2_5800	0.87	+0.3
6,618,185	-		Pf6N2E2_5800	0.87	-0.7
6,618,195	-		Pf6N2E2_5800	0.88	+0.3
6,618,261	+				-0.5
6,618,261	+				+0.3
6,618,278	+				-0.7
6,618,278	+				+0.3
6,618,278	+				+0.3
6,618,278	+				-0.9
6,618,278	+				+0.3
6,618,279	-				-0.7
6,618,306	+				-0.7
6,618,361	+				+0.3
6,618,368	-				+0.3
6,618,368	-				+0.3