Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5399

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
6,202,898	+		Pf6N2E2_5397	0.39	-1.3
6,202,898	+		Pf6N2E2_5397	0.39	+0.3
6,202,898	+		Pf6N2E2_5397	0.39	+0.3
6,202,899	-		Pf6N2E2_5397	0.39	+0.3
6,202,899	-		Pf6N2E2_5397	0.39	+0.3
6,202,899	-		Pf6N2E2_5397	0.39	+0.3
6,202,899	-		Pf6N2E2_5397	0.39	+1.0
6,202,899	-		Pf6N2E2_5397	0.39	-0.7
6,202,899	-		Pf6N2E2_5397	0.39	-1.7
6,202,900	+		Pf6N2E2_5397	0.40	-0.7
6,202,900	+		Pf6N2E2_5397	0.40	+0.3
6,202,900	+		Pf6N2E2_5397	0.40	+0.3
6,202,900	+		Pf6N2E2_5397	0.40	+0.6
6,202,900	+		Pf6N2E2_5397	0.40	+0.3
6,202,900	+		Pf6N2E2_5397	0.40	+0.3
6,202,900	+		Pf6N2E2_5397	0.40	-0.7
6,202,900	+		Pf6N2E2_5397	0.40	-0.8
6,202,900	+		Pf6N2E2_5397	0.40	+0.3
6,202,900	+		Pf6N2E2_5397	0.40	+1.9
6,202,901	-		Pf6N2E2_5397	0.40	+0.3
6,202,901	-		Pf6N2E2_5397	0.40	+0.3
6,202,901	-		Pf6N2E2_5397	0.40	-0.7
6,202,901	-		Pf6N2E2_5397	0.40	-0.7
6,202,901	-		Pf6N2E2_5397	0.40	+0.3
6,202,901	-		Pf6N2E2_5397	0.40	+0.3
6,202,901	-		Pf6N2E2_5397	0.40	-0.7
6,202,901	-		Pf6N2E2_5397	0.40	-0.7
6,202,901	-		Pf6N2E2_5397	0.40	+0.1
6,203,178	-		Pf6N2E2_5397	0.69	-0.5
6,203,178	-		Pf6N2E2_5397	0.69	-0.7
6,203,188	+		Pf6N2E2_5397	0.70	-0.5
6,203,188	+		Pf6N2E2_5397	0.70	-2.0
6,203,189	-		Pf6N2E2_5397	0.70	+0.3
6,203,237	-		Pf6N2E2_5397	0.75	-0.7
6,203,237	-		Pf6N2E2_5397	0.75	+0.3
6,203,237	-		Pf6N2E2_5397	0.75	-1.3
6,203,237	-		Pf6N2E2_5397	0.75	-0.4
6,203,237	-		Pf6N2E2_5397	0.75	+0.3
6,203,237	-		Pf6N2E2_5397	0.75	-1.8
6,203,237	-		Pf6N2E2_5397	0.75	-0.7
6,203,342	-		Pf6N2E2_5397	0.86	-0.1
6,203,502	+				+0.3
6,203,504	+				-0.7
6,203,504	+				-0.3
6,203,504	+				-0.7
6,203,504	+				+0.3
6,203,505	-				+0.3
6,203,505	-				-0.7
6,203,505	-				-2.0
6,203,535	-				-0.5
6,203,535	-				+0.3
6,203,535	-				+0.3
6,203,566	+				+0.3
6,203,566	+				+0.3
6,203,566	+				-1.1
6,203,566	+				-1.7
6,203,566	+				-0.4
6,203,566	+				+0.3
6,203,566	+				-0.3
6,203,566	+				+0.3
6,203,566	+				+0.3
6,203,566	+				-0.7
6,203,993	-		Pf6N2E2_5399	0.13	+0.3
6,203,993	-		Pf6N2E2_5399	0.13	-0.4
6,204,186	+		Pf6N2E2_5399	0.38	-0.7
6,204,187	-		Pf6N2E2_5399	0.38	+0.3
6,204,225	+		Pf6N2E2_5399	0.43	+1.3
6,204,225	+		Pf6N2E2_5399	0.43	-0.7
6,204,225	+		Pf6N2E2_5399	0.43	+0.8
6,204,225	+		Pf6N2E2_5399	0.43	+0.3
6,204,225	+		Pf6N2E2_5399	0.43	+0.3
6,204,225	+		Pf6N2E2_5399	0.43	+0.3
6,204,225	+		Pf6N2E2_5399	0.43	-0.7
6,204,225	+		Pf6N2E2_5399	0.43	-1.7
6,204,226	-		Pf6N2E2_5399	0.43	-1.7
6,204,226	-		Pf6N2E2_5399	0.43	+0.3
6,204,226	-		Pf6N2E2_5399	0.43	-0.7
6,204,438	+		Pf6N2E2_5399	0.71	-0.5
6,204,438	+		Pf6N2E2_5399	0.71	-1.4
6,204,438	+		Pf6N2E2_5399	0.71	+0.1
6,204,439	-		Pf6N2E2_5399	0.71	-1.4
6,204,439	-		Pf6N2E2_5399	0.71	-0.6
6,204,439	-		Pf6N2E2_5399	0.71	-1.3
6,204,459	+		Pf6N2E2_5399	0.74	-1.3
6,204,460	-		Pf6N2E2_5399	0.74	-0.7
6,204,460	-		Pf6N2E2_5399	0.74	-0.7
6,204,489	+		Pf6N2E2_5399	0.77	-0.7
6,204,489	+		Pf6N2E2_5399	0.77	-1.1
6,204,490	-		Pf6N2E2_5399	0.78	-0.1
6,204,490	-		Pf6N2E2_5399	0.78	-1.3
6,204,645	+				-0.4
6,204,645	+				-1.3
6,204,645	+				+0.3
6,204,646	-				+0.3
6,204,646	-				-0.7
6,204,646	-				-0.7
6,204,646	-				-0.7
6,204,646	-				+0.3
6,204,776	+				-1.7
6,204,776	+				+0.3
6,204,777	-				-0.7
6,204,800	+				-0.7
6,204,800	+				+0.3
6,204,801	-				-0.7
6,204,801	-				-0.5
6,204,801	-				-0.4
6,204,826	+				+1.3
6,204,827	-				-1.7
6,204,827	-				+0.3
6,204,827	-				+1.3
6,204,827	-				+0.3
6,204,974	+		Pf6N2E2_5400	0.12	-0.7
6,204,974	+		Pf6N2E2_5400	0.12	-1.3
6,204,975	-		Pf6N2E2_5400	0.12	-0.7
6,204,975	-		Pf6N2E2_5400	0.12	-0.7
6,205,250	+		Pf6N2E2_5400	0.31	+1.3
6,205,250	+		Pf6N2E2_5400	0.31	-0.7
6,205,250	+		Pf6N2E2_5400	0.31	+0.3
6,205,250	+		Pf6N2E2_5400	0.31	-1.0
6,205,250	+		Pf6N2E2_5400	0.31	+0.3
6,205,262	+		Pf6N2E2_5400	0.31	-0.7
6,205,262	+		Pf6N2E2_5400	0.31	+0.3
6,205,262	+		Pf6N2E2_5400	0.31	+0.3
6,205,262	+		Pf6N2E2_5400	0.31	+0.7
6,205,262	+		Pf6N2E2_5400	0.31	-0.3
6,205,263	-		Pf6N2E2_5400	0.31	+0.3
6,205,263	-		Pf6N2E2_5400	0.31	-0.7
6,205,263	-		Pf6N2E2_5400	0.31	-1.1
6,205,263	-		Pf6N2E2_5400	0.31	-1.0
6,205,286	+		Pf6N2E2_5400	0.33	-0.7
6,205,286	+		Pf6N2E2_5400	0.33	-0.7
6,205,286	+		Pf6N2E2_5400	0.33	+0.3
6,205,286	+		Pf6N2E2_5400	0.33	-1.3
6,205,286	+		Pf6N2E2_5400	0.33	-0.5
6,205,286	+		Pf6N2E2_5400	0.33	-0.7
6,205,287	-		Pf6N2E2_5400	0.33	-2.0
6,205,287	-		Pf6N2E2_5400	0.33	-2.2
6,205,287	-		Pf6N2E2_5400	0.33	+0.3
6,205,287	-		Pf6N2E2_5400	0.33	-0.5
6,205,287	-		Pf6N2E2_5400	0.33	+0.3
6,205,287	-		Pf6N2E2_5400	0.33	+0.3
6,205,287	-		Pf6N2E2_5400	0.33	-0.7
6,205,287	-		Pf6N2E2_5400	0.33	+0.3
6,205,290	+		Pf6N2E2_5400	0.33	+0.3
6,205,290	+		Pf6N2E2_5400	0.33	+0.3
6,205,290	+		Pf6N2E2_5400	0.33	-0.7
6,205,290	+		Pf6N2E2_5400	0.33	-1.3
6,205,290	+		Pf6N2E2_5400	0.33	+1.3
6,205,290	+		Pf6N2E2_5400	0.33	-1.7
6,205,290	+		Pf6N2E2_5400	0.33	+0.3
6,205,290	+		Pf6N2E2_5400	0.33	-0.7
6,205,290	+		Pf6N2E2_5400	0.33	-0.7
6,205,290	+		Pf6N2E2_5400	0.33	-0.3
6,205,290	+		Pf6N2E2_5400	0.33	+0.3
6,205,290	+		Pf6N2E2_5400	0.33	+0.3
6,205,291	-		Pf6N2E2_5400	0.33	+0.3
6,205,291	-		Pf6N2E2_5400	0.33	-0.7
6,205,291	-		Pf6N2E2_5400	0.33	+0.3
6,205,291	-		Pf6N2E2_5400	0.33	+0.3
6,205,291	-		Pf6N2E2_5400	0.33	+0.3
6,205,291	-		Pf6N2E2_5400	0.33	-0.8
6,205,291	-		Pf6N2E2_5400	0.33	-0.0
6,205,291	-		Pf6N2E2_5400	0.33	-0.4
6,205,291	-		Pf6N2E2_5400	0.33	-0.4
6,205,291	-		Pf6N2E2_5400	0.33	+0.3
6,205,291	-		Pf6N2E2_5400	0.33	+0.3
6,205,291	-		Pf6N2E2_5400	0.33	-1.3
6,205,291	-		Pf6N2E2_5400	0.33	+0.3
6,205,291	-		Pf6N2E2_5400	0.33	+0.3
6,205,291	-		Pf6N2E2_5400	0.33	+0.3
6,205,291	-		Pf6N2E2_5400	0.33	+0.3
6,205,291	-		Pf6N2E2_5400	0.33	+0.3
6,205,291	-		Pf6N2E2_5400	0.33	+0.3
6,205,291	-		Pf6N2E2_5400	0.33	-0.7
6,205,291	-		Pf6N2E2_5400	0.33	+0.3
6,205,291	-		Pf6N2E2_5400	0.33	+0.3
6,205,291	-		Pf6N2E2_5400	0.33	+0.7