Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5018

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
5,783,807	-		Pf6N2E2_5017	0.34	+0.3
5,783,807	-		Pf6N2E2_5017	0.34	+0.3
5,783,807	-		Pf6N2E2_5017	0.34	+0.3
5,783,807	-		Pf6N2E2_5017	0.34	+0.3
5,783,807	-		Pf6N2E2_5017	0.34	-0.7
5,783,891	-		Pf6N2E2_5017	0.42	+0.3
5,783,906	-		Pf6N2E2_5017	0.44	+0.3
5,783,906	-		Pf6N2E2_5017	0.44	-1.3
5,784,041	-		Pf6N2E2_5017	0.57	+0.3
5,784,041	-		Pf6N2E2_5017	0.57	+1.9
5,784,041	-		Pf6N2E2_5017	0.57	-1.0
5,784,107	-		Pf6N2E2_5017	0.64	-1.0
5,784,107	-		Pf6N2E2_5017	0.64	+0.3
5,784,107	-		Pf6N2E2_5017	0.64	+0.3
5,784,502	-				+0.3
5,784,528	-				+0.3
5,784,548	+				+0.3
5,784,548	+				+0.0
5,784,634	+				+0.3
5,784,635	-				+0.3
5,784,635	-				+0.3
5,785,005	+		Pf6N2E2_5018	0.23	-0.7
5,785,005	+		Pf6N2E2_5018	0.23	-1.3
5,785,006	-		Pf6N2E2_5018	0.23	-0.7
5,785,006	-		Pf6N2E2_5018	0.23	-1.3
5,785,017	+		Pf6N2E2_5018	0.24	-1.3
5,785,017	+		Pf6N2E2_5018	0.24	+0.3
5,785,018	-		Pf6N2E2_5018	0.24	-1.3
5,785,018	-		Pf6N2E2_5018	0.24	+0.3
5,785,018	-		Pf6N2E2_5018	0.24	+0.3
5,785,100	-		Pf6N2E2_5018	0.30	-1.7
5,785,100	-		Pf6N2E2_5018	0.30	-1.6
5,785,161	+		Pf6N2E2_5018	0.35	+0.3
5,785,515	+		Pf6N2E2_5018	0.61	-0.5
5,785,515	+		Pf6N2E2_5018	0.61	-1.7
5,785,516	-		Pf6N2E2_5018	0.61	-0.7
5,785,539	+		Pf6N2E2_5018	0.62	+0.3
5,785,539	+		Pf6N2E2_5018	0.62	-0.7
5,785,539	+		Pf6N2E2_5018	0.62	-0.7
5,785,539	+		Pf6N2E2_5018	0.62	-0.7
5,785,569	+		Pf6N2E2_5018	0.64	+0.3
5,785,569	+		Pf6N2E2_5018	0.64	+0.3
5,785,569	+		Pf6N2E2_5018	0.64	-0.7
5,785,569	+		Pf6N2E2_5018	0.64	-0.7
5,785,569	+		Pf6N2E2_5018	0.64	-0.7
5,785,570	-		Pf6N2E2_5018	0.65	-0.9
5,785,570	-		Pf6N2E2_5018	0.65	+0.3
5,785,726	-		Pf6N2E2_5018	0.76	+0.3
5,785,839	+		Pf6N2E2_5018	0.84	-0.7
5,785,840	-		Pf6N2E2_5018	0.84	+0.3
5,785,840	-		Pf6N2E2_5018	0.84	+0.3
5,785,969	-				-0.9
5,786,001	+				+0.3
5,786,001	+				-0.6
5,786,001	+				-0.9
5,786,001	+				-0.7
5,786,054	+		Pf6N2E2_5019	0.16	-1.6
5,786,054	+		Pf6N2E2_5019	0.16	-1.3
5,786,055	-		Pf6N2E2_5019	0.17	+0.7
5,786,055	-		Pf6N2E2_5019	0.17	+0.3
5,786,055	-		Pf6N2E2_5019	0.17	+0.3
5,786,056	+		Pf6N2E2_5019	0.17	-0.7
5,786,056	+		Pf6N2E2_5019	0.17	-0.7
5,786,056	+		Pf6N2E2_5019	0.17	-1.3
5,786,056	+		Pf6N2E2_5019	0.17	-0.4
5,786,056	+		Pf6N2E2_5019	0.17	-1.1
5,786,056	+		Pf6N2E2_5019	0.17	+0.3
5,786,056	+		Pf6N2E2_5019	0.17	-0.7
5,786,057	-		Pf6N2E2_5019	0.18	+0.3
5,786,057	-		Pf6N2E2_5019	0.18	-0.2
5,786,100	+		Pf6N2E2_5019	0.51	+0.3
5,786,100	+		Pf6N2E2_5019	0.51	+0.3
5,786,101	-		Pf6N2E2_5019	0.52	-0.6
5,786,101	-		Pf6N2E2_5019	0.52	+0.3
5,786,105	+		Pf6N2E2_5019	0.55	+0.3
5,786,105	+		Pf6N2E2_5019	0.55	-0.4
5,786,105	+		Pf6N2E2_5019	0.55	-0.7
5,786,105	+		Pf6N2E2_5019	0.55	-0.7
5,786,105	+		Pf6N2E2_5019	0.55	+0.3
5,786,105	+		Pf6N2E2_5019	0.55	-0.0
5,786,105	+		Pf6N2E2_5019	0.55	-1.0
5,786,106	-		Pf6N2E2_5019	0.55	+0.3
5,786,106	-		Pf6N2E2_5019	0.55	+0.3
5,786,106	-		Pf6N2E2_5019	0.55	-0.7
5,786,107	+		Pf6N2E2_5019	0.56	+0.3
5,786,107	+		Pf6N2E2_5019	0.56	+0.3
5,786,107	+		Pf6N2E2_5019	0.56	-0.7
5,786,107	+		Pf6N2E2_5019	0.56	+1.6
5,786,107	+		Pf6N2E2_5019	0.56	-0.7
5,786,108	-		Pf6N2E2_5019	0.57	-1.3
5,786,108	-		Pf6N2E2_5019	0.57	-1.3
5,786,108	-		Pf6N2E2_5019	0.57	-0.7
5,786,108	-		Pf6N2E2_5019	0.57	+0.2
5,786,108	-		Pf6N2E2_5019	0.57	+0.3
5,786,108	-		Pf6N2E2_5019	0.57	+0.6
5,786,175	+				-0.7
5,786,175	+				-1.3
5,786,175	+				+0.3
5,786,175	+				+1.3
5,786,175	+				-0.7
5,786,175	+				-1.3
5,786,176	-				+0.6
5,786,176	-				+0.3
5,786,176	-				-1.3
5,786,218	-		Pf6N2E2_5020	0.20	+0.3
5,786,232	+		Pf6N2E2_5020	0.25	-1.7
5,786,232	+		Pf6N2E2_5020	0.25	+0.4
5,786,233	-		Pf6N2E2_5020	0.25	+0.3
5,786,233	-		Pf6N2E2_5020	0.25	-0.7
5,786,233	-		Pf6N2E2_5020	0.25	-0.7
5,786,478	+				-1.3
5,786,478	+				+0.3
5,786,478	+				+0.3
5,786,478	+				-0.7
5,786,478	+				+0.3
5,786,478	+				+0.3
5,786,478	+				+0.3
5,786,479	-				-0.7
5,786,479	-				+0.3
5,786,479	-				-0.7
5,786,479	-				-1.0
5,786,479	-				+0.3
5,786,492	+				-0.3
5,786,492	+				+0.1
5,786,527	-				-1.3
5,786,527	-				+0.3
5,786,626	+				+0.3
5,786,627	-				-1.3
5,786,689	+				-0.7
5,786,689	+				-2.1