Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4929

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
5,680,579	+		Pf6N2E2_4928	0.11	+0.3
5,680,580	-		Pf6N2E2_4928	0.12	+0.3
5,680,918	+				+0.3
5,680,918	+				+0.3
5,680,918	+				-0.7
5,680,918	+				-0.7
5,680,918	+				+0.2
5,680,918	+				-0.2
5,680,919	-				-0.7
5,680,919	-				-0.7
5,680,919	-				-0.7
5,680,919	-				-0.7
5,680,919	-				-0.7
5,681,122	+		Pf6N2E2_4929	0.22	+0.3
5,681,123	-		Pf6N2E2_4929	0.22	+0.3
5,681,257	-		Pf6N2E2_4929	0.39	-0.7
5,681,257	-		Pf6N2E2_4929	0.39	-2.1
5,681,257	-		Pf6N2E2_4929	0.39	+0.3
5,681,421	+		Pf6N2E2_4929	0.60	-1.0
5,681,421	+		Pf6N2E2_4929	0.60	-0.8
5,681,421	+		Pf6N2E2_4929	0.60	-2.0
5,681,421	+		Pf6N2E2_4929	0.60	-2.3
5,681,421	+		Pf6N2E2_4929	0.60	-0.7
5,681,422	-		Pf6N2E2_4929	0.60	-1.8
5,681,422	-		Pf6N2E2_4929	0.60	+0.3
5,681,422	-		Pf6N2E2_4929	0.60	-1.3
5,681,422	-		Pf6N2E2_4929	0.60	+0.3
5,681,422	-		Pf6N2E2_4929	0.60	-0.7
5,681,422	-		Pf6N2E2_4929	0.60	+0.3
5,681,445	+		Pf6N2E2_4929	0.63	+0.3
5,681,446	-		Pf6N2E2_4929	0.63	-0.7
5,681,446	-		Pf6N2E2_4929	0.63	+0.3
5,681,707	+				+0.3
5,681,707	+				-1.3
5,681,707	+				-1.3
5,681,707	+				-0.4
5,681,708	-				-1.7
5,681,734	-				-2.5
5,681,881	+				+0.3
5,681,881	+				+0.9
5,681,883	+				+0.3
5,681,883	+				+0.3
5,681,883	+				-0.7
5,681,884	-				-0.4
5,681,884	-				+0.3
5,681,884	-				+0.3
5,681,884	-				+0.6
5,681,898	+				-0.7
5,682,021	+		Pf6N2E2_4930	0.12	+0.3
5,682,021	+		Pf6N2E2_4930	0.12	-0.4
5,682,021	+		Pf6N2E2_4930	0.12	+0.8
5,682,021	+		Pf6N2E2_4930	0.12	+0.3
5,682,022	-		Pf6N2E2_4930	0.12	+0.3
5,682,022	-		Pf6N2E2_4930	0.12	-0.7
5,682,022	-		Pf6N2E2_4930	0.12	-0.7
5,682,022	-		Pf6N2E2_4930	0.12	+0.3
5,682,198	+		Pf6N2E2_4930	0.21	-1.8
5,682,198	+		Pf6N2E2_4930	0.21	+0.3
5,682,291	+		Pf6N2E2_4930	0.26	+0.3
5,682,291	+		Pf6N2E2_4930	0.26	+0.3
5,682,348	+		Pf6N2E2_4930	0.29	+0.3
5,682,349	-		Pf6N2E2_4930	0.29	-0.7
5,682,397	-		Pf6N2E2_4930	0.32	-0.7
5,682,400	-		Pf6N2E2_4930	0.32	-1.4
5,682,400	-		Pf6N2E2_4930	0.32	-0.2
5,682,400	-		Pf6N2E2_4930	0.32	-0.7
5,682,400	-		Pf6N2E2_4930	0.32	+0.3
5,682,400	-		Pf6N2E2_4930	0.32	+0.3
5,682,400	-		Pf6N2E2_4930	0.32	-0.7
5,682,400	-		Pf6N2E2_4930	0.32	-1.3
5,682,400	-		Pf6N2E2_4930	0.32	+0.3
5,682,400	-		Pf6N2E2_4930	0.32	-0.3
5,682,400	-		Pf6N2E2_4930	0.32	+0.3
5,682,438	+		Pf6N2E2_4930	0.34	+0.9
5,682,438	+		Pf6N2E2_4930	0.34	-0.3
5,682,438	+		Pf6N2E2_4930	0.34	-0.7
5,682,438	+		Pf6N2E2_4930	0.34	-0.7
5,682,438	+		Pf6N2E2_4930	0.34	+0.0
5,682,479	-		Pf6N2E2_4930	0.36	+0.3
5,682,645	+		Pf6N2E2_4930	0.45	+0.3
5,682,646	-		Pf6N2E2_4930	0.45	+0.3
5,682,720	+		Pf6N2E2_4930	0.49	-1.7
5,682,721	-		Pf6N2E2_4930	0.49	+0.3