Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4891

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
5,640,728	+		Pf6N2E2_4889	0.85	-1.2
5,640,728	+		Pf6N2E2_4889	0.85	-0.6
5,640,728	+		Pf6N2E2_4889	0.85	-0.7
5,640,728	+		Pf6N2E2_4889	0.85	-0.7
5,640,728	+		Pf6N2E2_4889	0.85	-1.2
5,640,728	+		Pf6N2E2_4889	0.85	-1.0
5,640,851	+				-1.1
5,640,851	+				-0.7
5,640,851	+				-1.0
5,640,851	+				+0.3
5,640,851	+				-1.2
5,640,851	+				-1.0
5,640,851	+				-1.0
5,640,851	+				-0.5
5,640,853	+				-0.4
5,640,853	+				-0.7
5,640,853	+				-1.3
5,640,853	+				-0.4
5,640,922	+				-0.7
5,640,935	+				-0.7
5,640,935	+				-0.5
5,641,477	+				+0.7
5,641,478	-				+0.3
5,641,488	+				-1.0
5,641,488	+				+0.3
5,641,488	+				-0.7
5,641,488	+				+0.3
5,641,489	-				+0.3
5,641,533	+				-0.7
5,641,534	-				-1.7
5,641,534	-				+0.3
5,641,609	+				+0.3
5,641,609	+				-0.2
5,641,610	-				-1.7
5,641,610	-				+0.3
5,641,610	-				-0.7
5,641,610	-				-2.2
5,641,679	-		Pf6N2E2_4891	0.19	-1.5
5,641,679	-		Pf6N2E2_4891	0.19	+0.3
5,641,765	+		Pf6N2E2_4891	0.37	-0.7
5,641,765	+		Pf6N2E2_4891	0.37	-0.3
5,641,765	+		Pf6N2E2_4891	0.37	+0.3
5,641,765	+		Pf6N2E2_4891	0.37	-1.7
5,641,765	+		Pf6N2E2_4891	0.37	-0.7
5,641,765	+		Pf6N2E2_4891	0.37	-1.2
5,641,765	+		Pf6N2E2_4891	0.37	-0.7
5,641,766	-		Pf6N2E2_4891	0.37	-0.7
5,641,766	-		Pf6N2E2_4891	0.37	-1.0
5,641,766	-		Pf6N2E2_4891	0.37	+0.3
5,641,766	-		Pf6N2E2_4891	0.37	-0.7
5,641,766	-		Pf6N2E2_4891	0.37	+0.3
5,641,766	-		Pf6N2E2_4891	0.37	-0.8
5,641,769	+		Pf6N2E2_4891	0.38	-0.7
5,641,769	+		Pf6N2E2_4891	0.38	-0.7
5,641,769	+		Pf6N2E2_4891	0.38	-0.7
5,641,770	-		Pf6N2E2_4891	0.38	-0.7
5,641,770	-		Pf6N2E2_4891	0.38	-0.6
5,641,890	+		Pf6N2E2_4891	0.63	+0.3
5,641,891	-		Pf6N2E2_4891	0.63	-1.2
5,641,954	+		Pf6N2E2_4891	0.77	-0.7
5,641,955	-		Pf6N2E2_4891	0.77	+0.3
5,642,025	+				-1.1
5,642,026	-				-0.7
5,642,026	-				-0.7
5,642,075	+				-0.7
5,642,075	+				+0.3
5,642,076	-				-0.7
5,642,076	-				+0.3
5,642,076	-				+0.3
5,642,076	-				-1.7
5,642,076	-				+0.3
5,642,107	+				-1.2
5,642,107	+				-0.7
5,642,154	+				-0.7
5,642,154	+				-0.7
5,642,242	-				+0.3
5,642,248	-				+0.1
5,642,258	+				+0.3
5,642,258	+				+0.3
5,642,258	+				-0.3
5,642,259	-				+0.3
5,642,259	-				+0.3
5,642,259	-				-0.7
5,642,259	-				-0.5
5,642,264	+				-0.4
5,642,265	-				+0.3
5,642,265	-				+0.3
5,642,267	+				-0.7
5,642,268	-				-0.7
5,642,268	-				-0.7
5,642,335	+				+0.3
5,642,335	+				+0.3
5,642,336	-				+0.3
5,642,353	+				-0.3
5,642,365	-				-0.2
5,642,728	+		Pf6N2E2_4892	0.45	-0.7
5,642,729	-		Pf6N2E2_4892	0.45	-0.7
5,642,749	+		Pf6N2E2_4892	0.47	-1.2
5,642,749	+		Pf6N2E2_4892	0.47	+0.3
5,642,749	+		Pf6N2E2_4892	0.47	+0.3
5,642,750	-		Pf6N2E2_4892	0.48	-0.5
5,642,750	-		Pf6N2E2_4892	0.48	+0.3
5,642,750	-		Pf6N2E2_4892	0.48	+0.3
5,642,786	-		Pf6N2E2_4892	0.52	+0.3
5,642,815	+		Pf6N2E2_4892	0.55	+0.3
5,642,821	+		Pf6N2E2_4892	0.56	+0.3
5,642,822	-		Pf6N2E2_4892	0.56	+0.3
5,642,930	-		Pf6N2E2_4892	0.69	-0.7
5,642,930	-		Pf6N2E2_4892	0.69	+0.3
5,642,971	+		Pf6N2E2_4892	0.73	+0.3
5,642,972	-		Pf6N2E2_4892	0.74	+0.3