Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3823

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
4,457,688	+				+0.4
4,457,689	-				+0.4
4,457,758	-				-1.5
4,457,786	+				+0.4
4,457,786	+				-0.3
4,457,786	+				-0.6
4,457,786	+				+0.4
4,457,786	+				-0.4
4,457,787	-				+0.4
4,457,787	-				-0.3
4,457,787	-				+0.4
4,457,787	-				-0.1
4,457,788	+				-0.6
4,457,788	+				+0.4
4,457,788	+				-0.6
4,457,788	+				-0.6
4,457,788	+				-0.6
4,457,788	+				-1.0
4,457,788	+				-0.6
4,457,788	+				+0.4
4,457,788	+				+0.4
4,457,789	-				-1.1
4,457,789	-				+0.4
4,457,789	-				-1.6
4,457,789	-				-0.4
4,457,789	-				-0.6
4,457,789	-				-1.5
4,457,789	-				+0.4
4,457,789	-				-0.6
4,457,789	-				-1.2
4,457,789	-				-0.6
4,457,789	-				-0.6
4,457,789	-				+0.4
4,457,971	+		Pf6N2E2_3822	0.30	-0.3
4,457,971	+		Pf6N2E2_3822	0.30	-1.2
4,457,971	+		Pf6N2E2_3822	0.30	+0.4
4,457,971	+		Pf6N2E2_3822	0.30	+0.4
4,457,972	-		Pf6N2E2_3822	0.30	-1.2
4,458,038	+		Pf6N2E2_3822	0.41	+0.4
4,458,039	-		Pf6N2E2_3822	0.42	-2.2
4,458,039	-		Pf6N2E2_3822	0.42	+0.4
4,458,084	+		Pf6N2E2_3822	0.50	-1.2
4,458,084	+		Pf6N2E2_3822	0.50	-0.6
4,458,084	+		Pf6N2E2_3822	0.50	-0.1
4,458,085	-		Pf6N2E2_3822	0.50	+0.4
4,458,085	-		Pf6N2E2_3822	0.50	-0.5
4,458,085	-		Pf6N2E2_3822	0.50	-0.6
4,458,107	+		Pf6N2E2_3822	0.54	+0.4
4,458,107	+		Pf6N2E2_3822	0.54	-0.6
4,458,107	+		Pf6N2E2_3822	0.54	+0.4
4,458,107	+		Pf6N2E2_3822	0.54	-0.0
4,458,107	+		Pf6N2E2_3822	0.54	+0.4
4,458,108	-		Pf6N2E2_3822	0.54	+0.4
4,458,108	-		Pf6N2E2_3822	0.54	-0.9
4,458,108	-		Pf6N2E2_3822	0.54	-0.1
4,458,108	-		Pf6N2E2_3822	0.54	-0.9
4,458,108	-		Pf6N2E2_3822	0.54	-0.3
4,458,108	-		Pf6N2E2_3822	0.54	-0.5
4,458,108	-		Pf6N2E2_3822	0.54	-1.2
4,458,395	+				+1.0
4,458,395	+				+0.4
4,458,395	+				+0.4
4,458,396	-				-1.6
4,458,396	-				-0.6
4,458,432	+				+0.4
4,458,432	+				-1.6
4,458,432	+				-0.6
4,458,432	+				-0.6
4,458,432	+				-1.6
4,458,432	+				+0.4
4,458,433	-				-0.6
4,458,433	-				+0.4
4,458,433	-				-0.3
4,458,433	-				-0.6
4,458,433	-				-0.5
4,458,534	+		Pf6N2E2_3823	0.12	-1.4
4,458,534	+		Pf6N2E2_3823	0.12	-0.6
4,458,534	+		Pf6N2E2_3823	0.12	-0.1
4,458,534	+		Pf6N2E2_3823	0.12	+1.7
4,458,534	+		Pf6N2E2_3823	0.12	+0.2
4,458,534	+		Pf6N2E2_3823	0.12	+0.4
4,458,535	-		Pf6N2E2_3823	0.12	-0.7
4,458,535	-		Pf6N2E2_3823	0.12	-0.6
4,458,540	+		Pf6N2E2_3823	0.13	-0.1
4,458,540	+		Pf6N2E2_3823	0.13	-1.6
4,458,541	-		Pf6N2E2_3823	0.13	+0.4
4,458,541	-		Pf6N2E2_3823	0.13	-0.4
4,458,541	-		Pf6N2E2_3823	0.13	+0.1
4,458,541	-		Pf6N2E2_3823	0.13	+0.4
4,458,567	+		Pf6N2E2_3823	0.18	+0.4
4,458,567	+		Pf6N2E2_3823	0.18	+0.4
4,458,567	+		Pf6N2E2_3823	0.18	+0.4
4,458,567	+		Pf6N2E2_3823	0.18	-1.2
4,458,568	-		Pf6N2E2_3823	0.19	-0.6
4,458,702	+		Pf6N2E2_3823	0.45	+0.4
4,458,703	-		Pf6N2E2_3823	0.45	+0.8
4,458,703	-		Pf6N2E2_3823	0.45	-0.6
4,458,709	+		Pf6N2E2_3823	0.46	-0.6
4,458,710	-		Pf6N2E2_3823	0.46	-0.6
4,458,840	+		Pf6N2E2_3823	0.71	+0.4
4,458,841	-		Pf6N2E2_3823	0.71	-0.8
4,459,049	+		Pf6N2E2_3824	0.10	-0.2
4,459,049	+		Pf6N2E2_3824	0.10	-0.3
4,459,049	+		Pf6N2E2_3824	0.10	+0.4
4,459,049	+		Pf6N2E2_3824	0.10	+0.4
4,459,049	+		Pf6N2E2_3824	0.10	-0.6
4,459,049	+		Pf6N2E2_3824	0.10	+0.4
4,459,049	+		Pf6N2E2_3824	0.10	+0.4
4,459,049	+		Pf6N2E2_3824	0.10	-0.3
4,459,050	-		Pf6N2E2_3824	0.10	+0.4
4,459,050	-		Pf6N2E2_3824	0.10	-1.2
4,459,050	-		Pf6N2E2_3824	0.10	-0.6
4,459,050	-		Pf6N2E2_3824	0.10	-1.2
4,459,050	-		Pf6N2E2_3824	0.10	+0.4
4,459,050	-		Pf6N2E2_3824	0.10	-0.5
4,459,050	-		Pf6N2E2_3824	0.10	-0.7
4,459,050	-		Pf6N2E2_3824	0.10	-0.6
4,459,050	-		Pf6N2E2_3824	0.10	+0.4
4,459,050	-		Pf6N2E2_3824	0.10	-0.6
4,459,050	-		Pf6N2E2_3824	0.10	+0.4
4,459,050	-		Pf6N2E2_3824	0.10	-1.2
4,459,051	+		Pf6N2E2_3824	0.10	+0.4
4,459,051	+		Pf6N2E2_3824	0.10	-0.6
4,459,051	+		Pf6N2E2_3824	0.10	-1.6
4,459,051	+		Pf6N2E2_3824	0.10	+0.4
4,459,051	+		Pf6N2E2_3824	0.10	-0.6
4,459,052	-		Pf6N2E2_3824	0.11	-1.2
4,459,052	-		Pf6N2E2_3824	0.11	-0.6
4,459,052	-		Pf6N2E2_3824	0.11	-0.8
4,459,052	-		Pf6N2E2_3824	0.11	-0.6
4,459,052	-		Pf6N2E2_3824	0.11	+0.4
4,459,055	+		Pf6N2E2_3824	0.11	-1.2
4,459,055	+		Pf6N2E2_3824	0.11	-0.6
4,459,055	+		Pf6N2E2_3824	0.11	-0.6
4,459,055	+		Pf6N2E2_3824	0.11	+0.4
4,459,055	+		Pf6N2E2_3824	0.11	+0.4
4,459,055	+		Pf6N2E2_3824	0.11	-0.6
4,459,055	+		Pf6N2E2_3824	0.11	-0.8
4,459,055	+		Pf6N2E2_3824	0.11	-0.6
4,459,056	-		Pf6N2E2_3824	0.11	-0.6
4,459,056	-		Pf6N2E2_3824	0.11	+0.4
4,459,056	-		Pf6N2E2_3824	0.11	+0.1
4,459,056	-		Pf6N2E2_3824	0.11	-0.6
4,459,119	+		Pf6N2E2_3824	0.21	+0.4
4,459,119	+		Pf6N2E2_3824	0.21	+1.0
4,459,119	+		Pf6N2E2_3824	0.21	+0.4
4,459,120	-		Pf6N2E2_3824	0.21	+0.4
4,459,120	-		Pf6N2E2_3824	0.21	+0.4
4,459,120	-		Pf6N2E2_3824	0.21	-0.2
4,459,120	-		Pf6N2E2_3824	0.21	-0.6
4,459,420	-		Pf6N2E2_3824	0.70	+0.1
4,459,477	+		Pf6N2E2_3824	0.79	+0.4
4,459,477	+		Pf6N2E2_3824	0.79	+0.4
4,459,478	-		Pf6N2E2_3824	0.79	+0.4
4,459,631	-				+1.0
4,459,631	-				-0.6
4,459,633	-				-0.1
4,459,796	-				-1.4
4,459,806	+				-0.6
4,459,806	+				+0.4
4,459,843	+				-0.6
4,459,844	-				-0.6
4,459,844	-				+0.4
4,459,844	-				-0.6
4,459,844	-				+0.4
4,459,873	-				+0.4
4,459,883	+				-0.6
4,459,883	+				-0.6
4,459,883	+				-2.2
4,459,884	-				-0.6
4,459,884	-				+0.4
4,459,951	+				-0.6