Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3093

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
3,580,932	+		Pf6N2E2_3092	0.19	-0.7
3,580,932	+		Pf6N2E2_3092	0.19	-1.2
3,580,932	+		Pf6N2E2_3092	0.19	-0.6
3,580,932	+		Pf6N2E2_3092	0.19	-2.1
3,580,932	+		Pf6N2E2_3092	0.19	-0.6
3,580,932	+		Pf6N2E2_3092	0.19	-0.7
3,580,932	+		Pf6N2E2_3092	0.19	+0.3
3,580,932	+		Pf6N2E2_3092	0.19	-0.7
3,580,932	+		Pf6N2E2_3092	0.19	+0.3
3,580,933	-		Pf6N2E2_3092	0.19	-0.5
3,580,933	-		Pf6N2E2_3092	0.19	-0.7
3,580,933	-		Pf6N2E2_3092	0.19	+0.3
3,580,933	-		Pf6N2E2_3092	0.19	+0.3
3,580,933	-		Pf6N2E2_3092	0.19	+0.3
3,580,933	-		Pf6N2E2_3092	0.19	+0.3
3,580,933	-		Pf6N2E2_3092	0.19	-0.7
3,580,933	-		Pf6N2E2_3092	0.19	-1.7
3,581,332	-		Pf6N2E2_3092	0.55	+0.3
3,581,464	-		Pf6N2E2_3092	0.67	+0.3
3,581,682	+		Pf6N2E2_3092	0.87	-0.7
3,581,777	+				+0.3
3,581,818	-				+1.3
3,581,861	-				+0.3
3,581,861	-				+0.3
3,581,867	-				-1.2
3,581,877	-				-1.2
3,581,877	-				+0.3
3,581,881	+				-0.7
3,581,881	+				+0.3
3,581,885	-				-0.7
3,581,911	-				-1.2
3,582,035	-		Pf6N2E2_3093	0.18	+1.3
3,582,086	+		Pf6N2E2_3093	0.26	+0.3
3,582,086	+		Pf6N2E2_3093	0.26	-0.7
3,582,087	-		Pf6N2E2_3093	0.26	-0.7
3,582,087	-		Pf6N2E2_3093	0.26	+0.3
3,582,087	-		Pf6N2E2_3093	0.26	+0.3
3,582,400	+		Pf6N2E2_3093	0.75	+1.3
3,582,400	+		Pf6N2E2_3093	0.75	+0.3
3,582,401	-		Pf6N2E2_3093	0.75	+0.3
3,582,513	+				-1.7
3,582,513	+				+0.3
3,582,513	+				+0.3
3,582,513	+				+0.3
3,582,513	+				-1.2
3,582,514	-				+0.3
3,582,514	-				+0.3
3,582,514	-				-1.2
3,582,554	+				+0.3
3,582,554	+				-0.2
3,582,555	-				-0.7
3,582,653	+				-2.1
3,582,662	+				+0.3
3,582,711	+		Pf6N2E2_3094	0.11	-2.5
3,582,711	+		Pf6N2E2_3094	0.11	+0.3
3,582,711	+		Pf6N2E2_3094	0.11	-1.7
3,582,711	+		Pf6N2E2_3094	0.11	-1.7
3,582,711	+		Pf6N2E2_3094	0.11	+0.3
3,582,711	+		Pf6N2E2_3094	0.11	+0.3
3,582,712	-		Pf6N2E2_3094	0.11	-0.7
3,582,712	-		Pf6N2E2_3094	0.11	-2.4
3,582,712	-		Pf6N2E2_3094	0.11	-1.2
3,582,881	+		Pf6N2E2_3094	0.32	+0.3
3,582,881	+		Pf6N2E2_3094	0.32	+0.3
3,582,882	-		Pf6N2E2_3094	0.32	-0.7
3,583,178	+		Pf6N2E2_3094	0.70	+0.3
3,583,178	+		Pf6N2E2_3094	0.70	+0.3
3,583,178	+		Pf6N2E2_3094	0.70	+0.3
3,583,179	-		Pf6N2E2_3094	0.70	+0.3
3,583,431	-		Pf6N2E2_3095	0.21	-1.0
3,583,553	+				-1.2
3,583,553	+				+0.3
3,583,554	-				-0.7
3,583,554	-				+0.3