Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2956

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
3,446,817	-				+0.3
3,446,817	-				-0.7
3,446,842	-				-1.0
3,446,842	-				-0.9
3,446,904	+				+0.3
3,446,905	-				-0.6
3,447,005	+				+0.3
3,447,005	+				-0.6
3,447,006	-				+0.3
3,447,006	-				-0.7
3,447,006	-				-1.0
3,447,006	-				-0.4
3,447,027	+				+0.3
3,447,027	+				+0.1
3,447,028	-				+0.3
3,447,028	-				+0.3
3,447,260	-		Pf6N2E2_2956	0.27	+0.3
3,447,260	-		Pf6N2E2_2956	0.27	-0.3
3,447,260	-		Pf6N2E2_2956	0.27	-0.2
3,447,270	+		Pf6N2E2_2956	0.28	+0.3
3,447,270	+		Pf6N2E2_2956	0.28	-0.5
3,447,271	-		Pf6N2E2_2956	0.28	+0.3
3,447,271	-		Pf6N2E2_2956	0.28	-0.7
3,447,271	-		Pf6N2E2_2956	0.28	-0.7
3,447,303	+		Pf6N2E2_2956	0.31	+0.3
3,447,304	-		Pf6N2E2_2956	0.31	-0.7
3,447,304	-		Pf6N2E2_2956	0.31	+0.3
3,447,356	+		Pf6N2E2_2956	0.36	+0.3
3,447,356	+		Pf6N2E2_2956	0.36	+0.4
3,447,393	+		Pf6N2E2_2956	0.40	-0.7
3,447,393	+		Pf6N2E2_2956	0.40	+0.3
3,447,394	-		Pf6N2E2_2956	0.40	-0.7
3,447,394	-		Pf6N2E2_2956	0.40	-0.4
3,447,487	-		Pf6N2E2_2956	0.49	+0.3
3,447,487	-		Pf6N2E2_2956	0.49	-0.5
3,447,487	-		Pf6N2E2_2956	0.49	+0.3
3,447,619	-		Pf6N2E2_2956	0.62	-0.7
3,447,721	-		Pf6N2E2_2956	0.72	-0.7
3,447,945	+				+0.3
3,447,945	+				-0.7
3,447,946	-				-1.3
3,448,079	+				+0.7
3,448,079	+				-1.7
3,448,079	+				+0.0
3,448,080	-				-0.3
3,448,080	-				-0.3
3,448,080	-				+0.3
3,448,121	+				+0.3
3,448,121	+				-1.1
3,448,122	-				+0.3
3,448,122	-				-0.7
3,448,226	+		Pf6N2E2_2957	0.13	+0.3
3,448,227	-		Pf6N2E2_2957	0.13	-0.7
3,448,267	-		Pf6N2E2_2957	0.16	-0.7
3,448,314	+		Pf6N2E2_2957	0.19	-1.7
3,448,314	+		Pf6N2E2_2957	0.19	-0.5
3,448,314	+		Pf6N2E2_2957	0.19	-0.5
3,448,314	+		Pf6N2E2_2957	0.19	+0.3
3,448,315	-		Pf6N2E2_2957	0.19	+0.0
3,448,568	+		Pf6N2E2_2957	0.34	+0.3
3,448,568	+		Pf6N2E2_2957	0.34	+0.3