Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2149

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
2,554,042	-		Pf6N2E2_2148	0.16	+0.6
2,554,096	-		Pf6N2E2_2148	0.23	+0.8
2,554,173	+		Pf6N2E2_2148	0.34	+0.2
2,554,173	+		Pf6N2E2_2148	0.34	+0.2
2,554,173	+		Pf6N2E2_2148	0.34	-0.8
2,554,174	-		Pf6N2E2_2148	0.35	-1.2
2,554,174	-		Pf6N2E2_2148	0.35	-0.8
2,554,200	+		Pf6N2E2_2148	0.38	-0.4
2,554,344	+		Pf6N2E2_2148	0.59	+0.2
2,554,560	+		Pf6N2E2_2148	0.90	-0.8
2,554,560	+		Pf6N2E2_2148	0.90	+0.2
2,554,561	-				+0.2
2,554,678	+				-0.7
2,554,678	+				-1.2
2,554,678	+				+0.2
2,554,679	-				+0.2
2,554,707	-				+0.2
2,554,759	+				+0.2
2,554,759	+				+0.2
2,554,760	-				-0.8
2,554,779	+				+0.2
2,554,779	+				+0.2
2,554,780	-				+0.2
2,554,780	-				+0.2
2,554,939	+				-1.8
2,554,939	+				+0.2
2,554,939	+				+0.2
2,554,940	-				-0.8
2,554,940	-				-1.3
2,554,940	-				-0.8
2,554,943	+				-0.5
2,554,944	-				+0.2
2,554,944	-				-0.8
2,554,944	-				-1.2
2,555,210	+		Pf6N2E2_2149	0.41	-0.8
2,555,211	-		Pf6N2E2_2149	0.41	-1.2
2,555,211	-		Pf6N2E2_2149	0.41	-0.8
2,555,211	-		Pf6N2E2_2149	0.41	-0.8
2,555,267	+		Pf6N2E2_2149	0.49	-1.4
2,555,267	+		Pf6N2E2_2149	0.49	-0.8
2,555,268	-		Pf6N2E2_2149	0.49	+0.2
2,555,269	+		Pf6N2E2_2149	0.49	-0.8
2,555,269	+		Pf6N2E2_2149	0.49	+0.2
2,555,270	-		Pf6N2E2_2149	0.49	+0.2
2,555,270	-		Pf6N2E2_2149	0.49	-1.4
2,555,270	-		Pf6N2E2_2149	0.49	-1.1
2,555,270	-		Pf6N2E2_2149	0.49	+0.2
2,555,270	-		Pf6N2E2_2149	0.49	-0.8
2,555,273	+		Pf6N2E2_2149	0.50	+0.2
2,555,273	+		Pf6N2E2_2149	0.50	-0.8
2,555,273	+		Pf6N2E2_2149	0.50	-2.6
2,555,273	+		Pf6N2E2_2149	0.50	+0.2
2,555,273	+		Pf6N2E2_2149	0.50	+0.2
2,555,273	+		Pf6N2E2_2149	0.50	-0.8
2,555,273	+		Pf6N2E2_2149	0.50	-1.4
2,555,273	+		Pf6N2E2_2149	0.50	+0.2
2,555,273	+		Pf6N2E2_2149	0.50	+0.6
2,555,274	-		Pf6N2E2_2149	0.50	+0.2
2,555,274	-		Pf6N2E2_2149	0.50	-1.4
2,555,274	-		Pf6N2E2_2149	0.50	+0.2
2,555,274	-		Pf6N2E2_2149	0.50	-0.8
2,555,274	-		Pf6N2E2_2149	0.50	-0.8
2,555,274	-		Pf6N2E2_2149	0.50	-1.4
2,555,274	-		Pf6N2E2_2149	0.50	-1.0
2,555,274	-		Pf6N2E2_2149	0.50	+0.2
2,555,274	-		Pf6N2E2_2149	0.50	+0.2
2,555,274	-		Pf6N2E2_2149	0.50	+0.2
2,555,274	-		Pf6N2E2_2149	0.50	-1.6
2,555,274	-		Pf6N2E2_2149	0.50	+0.2
2,555,274	-		Pf6N2E2_2149	0.50	-0.4
2,555,274	-		Pf6N2E2_2149	0.50	+0.2
2,555,274	-		Pf6N2E2_2149	0.50	+0.2
2,555,274	-		Pf6N2E2_2149	0.50	+0.2
2,555,274	-		Pf6N2E2_2149	0.50	-1.8
2,555,274	-		Pf6N2E2_2149	0.50	-1.4
2,555,274	-		Pf6N2E2_2149	0.50	-0.2
2,555,276	-		Pf6N2E2_2149	0.50	+0.2
2,555,276	-		Pf6N2E2_2149	0.50	+0.2
2,555,276	-		Pf6N2E2_2149	0.50	-1.4
2,555,339	+		Pf6N2E2_2149	0.59	-0.8
2,555,340	-		Pf6N2E2_2149	0.59	-0.6
2,555,340	-		Pf6N2E2_2149	0.59	-0.8
2,555,390	+		Pf6N2E2_2149	0.66	-2.3
2,555,391	-		Pf6N2E2_2149	0.67	-0.0
2,555,391	-		Pf6N2E2_2149	0.67	+0.2
2,555,408	+		Pf6N2E2_2149	0.69	+0.2
2,555,408	+		Pf6N2E2_2149	0.69	+0.2
2,555,409	-		Pf6N2E2_2149	0.69	-1.4
2,555,409	-		Pf6N2E2_2149	0.69	+0.2
2,555,409	-		Pf6N2E2_2149	0.69	+0.2
2,555,409	-		Pf6N2E2_2149	0.69	+0.2
2,555,409	-		Pf6N2E2_2149	0.69	-0.6
2,555,409	-		Pf6N2E2_2149	0.69	-0.6
2,555,409	-		Pf6N2E2_2149	0.69	+0.2
2,555,409	-		Pf6N2E2_2149	0.69	-0.8
2,555,409	-		Pf6N2E2_2149	0.69	+0.2
2,555,430	-		Pf6N2E2_2149	0.72	+0.2
2,555,525	+		Pf6N2E2_2149	0.86	+0.2
2,555,525	+		Pf6N2E2_2149	0.86	+0.2
2,555,526	-		Pf6N2E2_2149	0.86	+0.2
2,555,526	-		Pf6N2E2_2149	0.86	+0.2
2,555,526	-		Pf6N2E2_2149	0.86	+0.2
2,555,579	+				-0.8
2,555,579	+				+0.2
2,555,580	-				-0.8
2,555,580	-				-0.3
2,555,580	-				-0.8
2,555,580	-				-1.4
2,555,580	-				+1.2
2,555,580	-				-0.8
2,555,580	-				-1.4
2,555,689	-				-0.8
2,555,689	-				+0.6
2,555,757	+				+0.2
2,555,757	+				+0.2
2,555,757	+				+0.2
2,555,757	+				-0.8
2,555,758	-				+0.2
2,555,758	-				+0.2
2,555,758	-				-0.8
2,555,758	-				-0.4
2,555,758	-				+0.2
2,555,758	-				-0.2
2,555,758	-				+0.2
2,555,758	-				-1.8
2,555,758	-				-0.4
2,555,769	+		Pf6N2E2_2150	0.10	-1.4
2,555,769	+		Pf6N2E2_2150	0.10	-0.1
2,555,769	+		Pf6N2E2_2150	0.10	-0.8
2,555,769	+		Pf6N2E2_2150	0.10	+0.2
2,555,772	+		Pf6N2E2_2150	0.10	-0.3
2,555,772	+		Pf6N2E2_2150	0.10	-0.8
2,555,773	-		Pf6N2E2_2150	0.11	-0.8
2,555,773	-		Pf6N2E2_2150	0.11	-0.5
2,555,773	-		Pf6N2E2_2150	0.11	-0.8
2,555,773	-		Pf6N2E2_2150	0.11	-0.1
2,555,961	-		Pf6N2E2_2150	0.28	-0.8
2,555,961	-		Pf6N2E2_2150	0.28	+0.2
2,555,994	+		Pf6N2E2_2150	0.31	-0.3
2,555,994	+		Pf6N2E2_2150	0.31	+0.2
2,555,995	-		Pf6N2E2_2150	0.31	-0.8
2,555,995	-		Pf6N2E2_2150	0.31	+0.2
2,555,995	-		Pf6N2E2_2150	0.31	-0.8
2,555,995	-		Pf6N2E2_2150	0.31	+0.2
2,556,072	+		Pf6N2E2_2150	0.38	-0.8
2,556,073	-		Pf6N2E2_2150	0.38	+0.2
2,556,073	-		Pf6N2E2_2150	0.38	-0.8
2,556,162	-		Pf6N2E2_2150	0.46	-0.6
2,556,162	-		Pf6N2E2_2150	0.46	+0.2
2,556,249	+		Pf6N2E2_2150	0.54	-0.8
2,556,250	-		Pf6N2E2_2150	0.54	-0.4
2,556,390	+		Pf6N2E2_2150	0.66	-1.3
2,556,390	+		Pf6N2E2_2150	0.66	-0.8
2,556,390	+		Pf6N2E2_2150	0.66	+0.2
2,556,390	+		Pf6N2E2_2150	0.66	-0.2
2,556,390	+		Pf6N2E2_2150	0.66	-1.4
2,556,391	-		Pf6N2E2_2150	0.66	-0.8
2,556,391	-		Pf6N2E2_2150	0.66	-0.8
2,556,603	+		Pf6N2E2_2150	0.86	+0.2
2,556,603	+		Pf6N2E2_2150	0.86	-1.0
2,556,603	+		Pf6N2E2_2150	0.86	-0.7
2,556,603	+		Pf6N2E2_2150	0.86	-0.8
2,556,603	+		Pf6N2E2_2150	0.86	+0.2
2,556,603	+		Pf6N2E2_2150	0.86	-0.8
2,556,604	-		Pf6N2E2_2150	0.86	+0.2