Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1925

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
2,279,267	-		Pf6N2E2_1924	0.22	+0.1
2,279,294	-		Pf6N2E2_1924	0.24	+0.1
2,279,294	-		Pf6N2E2_1924	0.24	-0.4
2,279,303	+		Pf6N2E2_1924	0.25	-1.4
2,279,388	-		Pf6N2E2_1924	0.32	-0.9
2,279,436	+		Pf6N2E2_1924	0.36	+0.1
2,279,457	+		Pf6N2E2_1924	0.38	+0.1
2,279,482	+		Pf6N2E2_1924	0.40	+0.1
2,279,482	+		Pf6N2E2_1924	0.40	+0.1
2,279,682	+		Pf6N2E2_1924	0.57	+0.1
2,279,682	+		Pf6N2E2_1924	0.57	-0.9
2,279,682	+		Pf6N2E2_1924	0.57	-2.2
2,279,683	-		Pf6N2E2_1924	0.57	+0.1
2,279,683	-		Pf6N2E2_1924	0.57	+0.1
2,279,683	-		Pf6N2E2_1924	0.57	+0.1
2,279,683	-		Pf6N2E2_1924	0.57	+0.1
2,279,683	-		Pf6N2E2_1924	0.57	-1.4
2,279,683	-		Pf6N2E2_1924	0.57	+0.1
2,279,817	+		Pf6N2E2_1924	0.69	+0.1
2,279,817	+		Pf6N2E2_1924	0.69	-0.1
2,279,891	-		Pf6N2E2_1924	0.75	-1.4
2,279,898	+		Pf6N2E2_1924	0.75	+0.1
2,279,903	+		Pf6N2E2_1924	0.76	-1.4
2,280,033	+		Pf6N2E2_1924	0.87	+0.1
2,280,034	-		Pf6N2E2_1924	0.87	+0.1
2,280,034	-		Pf6N2E2_1924	0.87	+0.1
2,280,111	+				-1.4
2,280,111	+				-0.7
2,280,112	-				+0.1
2,280,112	-				-0.9
2,280,167	+				-2.0
2,280,167	+				-1.9
2,280,234	-				-0.9
2,280,239	+				-0.9
2,280,239	+				-0.9
2,280,239	+				+0.1
2,280,239	+				+0.1
2,280,239	+				+0.1
2,280,240	-				-1.4
2,280,244	-				+0.1
2,280,488	+		Pf6N2E2_1925	0.39	+0.1
2,280,489	-		Pf6N2E2_1925	0.39	-0.7
2,280,544	-		Pf6N2E2_1925	0.48	-0.9
2,280,551	+		Pf6N2E2_1925	0.49	-1.9
2,280,551	+		Pf6N2E2_1925	0.49	+0.1
2,280,551	+		Pf6N2E2_1925	0.49	+0.1
2,280,552	-		Pf6N2E2_1925	0.49	+0.1
2,280,560	+		Pf6N2E2_1925	0.50	-0.9
2,280,561	-		Pf6N2E2_1925	0.51	+0.1
2,280,566	+		Pf6N2E2_1925	0.51	+0.1
2,280,566	+		Pf6N2E2_1925	0.51	-0.6
2,280,567	-		Pf6N2E2_1925	0.51	-0.4
2,280,570	+		Pf6N2E2_1925	0.52	-0.9
2,280,634	+		Pf6N2E2_1925	0.62	+0.1
2,280,634	+		Pf6N2E2_1925	0.62	-1.0
2,280,645	+		Pf6N2E2_1925	0.64	-1.3
2,281,006	-				+0.1
2,281,046	+				-0.9
2,281,135	-				-0.9
2,281,329	+				-1.4
2,281,428	-				+1.1
2,281,457	+				-1.4
2,281,520	-				+0.1
2,281,520	-				-1.9
2,281,585	+		Pf6N2E2_1927	0.13	+0.1
2,281,585	+		Pf6N2E2_1927	0.13	-0.9
2,281,702	+		Pf6N2E2_1927	0.24	+0.1
2,281,703	-		Pf6N2E2_1927	0.24	+0.1
2,281,703	-		Pf6N2E2_1927	0.24	+0.1
2,281,703	-		Pf6N2E2_1927	0.24	-1.1
2,281,840	+		Pf6N2E2_1927	0.36	+0.1
2,281,840	+		Pf6N2E2_1927	0.36	-2.7
2,281,841	-		Pf6N2E2_1927	0.36	-0.3
2,281,841	-		Pf6N2E2_1927	0.36	+1.1
2,281,843	-		Pf6N2E2_1927	0.36	+1.1
2,281,843	-		Pf6N2E2_1927	0.36	+0.1
2,281,851	+		Pf6N2E2_1927	0.37	-0.9