Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1838

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
2,176,008	+		Pf6N2E2_1837	0.39	+0.1
2,176,331	-		Pf6N2E2_1837	0.61	-0.9
2,176,606	+		Pf6N2E2_1837	0.80	+0.1
2,176,607	-		Pf6N2E2_1837	0.80	+0.1
2,176,754	+		Pf6N2E2_1837	0.90	+0.1
2,176,754	+		Pf6N2E2_1837	0.90	+0.1
2,176,877	-				+0.1
2,176,924	+				+0.1
2,176,925	-				-0.9
2,177,029	+		Pf6N2E2_1838	0.12	+0.1
2,177,201	+		Pf6N2E2_1838	0.31	+0.1
2,177,267	+		Pf6N2E2_1838	0.39	+0.1
2,177,456	-		Pf6N2E2_1838	0.59	+0.1
2,177,456	-		Pf6N2E2_1838	0.59	+0.1
2,177,603	+		Pf6N2E2_1838	0.76	+1.1
2,177,792	-				+0.1
2,178,115	+		Pf6N2E2_1839	0.40	+0.1
2,178,225	+		Pf6N2E2_1839	0.55	+0.1
2,178,254	-		Pf6N2E2_1839	0.59	-0.9
2,178,254	-		Pf6N2E2_1839	0.59	-0.9
2,178,302	-		Pf6N2E2_1839	0.65	-0.9
2,178,435	-		Pf6N2E2_1839	0.83	+0.1
2,178,500	+				+0.1
2,178,707	-		Pf6N2E2_1840	0.19	-0.0