Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1178

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
1,378,169	-		Pf6N2E2_1177	0.15	+0.1
1,378,204	-		Pf6N2E2_1177	0.18	+0.1
1,378,356	+		Pf6N2E2_1177	0.31	+0.1
1,378,356	+		Pf6N2E2_1177	0.31	+0.1
1,378,602	+		Pf6N2E2_1177	0.53	-0.9
1,378,602	+		Pf6N2E2_1177	0.53	-0.9
1,378,602	+		Pf6N2E2_1177	0.53	-1.2
1,378,602	+		Pf6N2E2_1177	0.53	+0.1
1,378,603	-		Pf6N2E2_1177	0.53	+0.1
1,378,603	-		Pf6N2E2_1177	0.53	-0.5
1,378,603	-		Pf6N2E2_1177	0.53	+0.1
1,378,649	+		Pf6N2E2_1177	0.57	+0.1
1,378,650	-		Pf6N2E2_1177	0.57	+0.1
1,378,668	+		Pf6N2E2_1177	0.59	+0.1
1,378,668	+		Pf6N2E2_1177	0.59	+0.4
1,378,669	-		Pf6N2E2_1177	0.59	-1.5
1,379,458	+		Pf6N2E2_1178	0.33	+1.5
1,379,470	-		Pf6N2E2_1178	0.34	+0.1
1,379,494	-		Pf6N2E2_1178	0.36	+0.1
1,379,494	-		Pf6N2E2_1178	0.36	-0.9
1,379,512	-		Pf6N2E2_1178	0.37	+0.1
1,379,869	+		Pf6N2E2_1178	0.70	+0.4
1,380,072	+		Pf6N2E2_1178	0.88	-0.9
1,380,073	-		Pf6N2E2_1178	0.88	+0.1
1,380,073	-		Pf6N2E2_1178	0.88	+0.1
1,380,102	-				+0.1
1,380,198	+				+0.1
1,380,198	+				-0.7
1,380,199	-				+0.1
1,380,199	-				+0.1
1,380,199	-				-0.9
1,380,199	-				-0.2
1,380,199	-				+0.1
1,380,199	-				+0.1
1,380,421	+				+0.3
1,380,422	-				+0.1
1,380,423	+				+0.1
1,380,506	-				-1.1
1,380,506	-				-0.9
1,380,562	-				+0.1
1,380,562	-				+0.1
1,380,634	+				+0.1
1,380,635	-				+0.1
1,380,731	-				+0.1
1,380,731	-				+0.1
1,380,731	-				-0.5
1,380,731	-				+0.6
1,380,731	-				+0.1
1,380,731	-				+0.1
1,380,751	+				+0.1
1,380,859	-				+0.1
1,380,859	-				+0.1
1,380,861	+				+0.1
1,380,861	+				+0.1
1,380,861	+				-0.9
1,380,862	-				-0.9
1,380,865	+				+0.1
1,380,866	-				+0.1
1,380,866	-				+0.1
1,380,866	-				+0.1
1,380,866	-				+1.1
1,380,866	-				+0.1
1,380,868	+				+0.1
1,380,868	+				-1.7
1,380,869	-				-0.9
1,380,869	-				+0.1
1,380,869	-				+0.1
1,380,931	+				-0.7
1,380,931	+				-2.2
1,380,931	+				-0.2
1,380,932	-				+0.1
1,380,934	-				+0.1
1,380,934	-				+0.1
1,381,170	+				+0.1
1,381,171	-				+0.1
1,381,194	+				+0.1