Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5969

Experiment: Ying_OrganicAcid7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 3
6,786,818	-		Pf6N2E2_5968	0.18	+0.3
6,787,035	+		Pf6N2E2_5968	0.39	-0.7
6,787,035	+		Pf6N2E2_5968	0.39	-0.7
6,787,036	-		Pf6N2E2_5968	0.39	-3.1
6,787,036	-		Pf6N2E2_5968	0.39	+0.3
6,787,036	-		Pf6N2E2_5968	0.39	-0.7
6,787,041	-		Pf6N2E2_5968	0.40	-1.7
6,787,041	-		Pf6N2E2_5968	0.40	-1.0
6,787,041	-		Pf6N2E2_5968	0.40	-1.1
6,787,041	-		Pf6N2E2_5968	0.40	-0.9
6,787,133	+		Pf6N2E2_5968	0.49	-0.7
6,787,133	+		Pf6N2E2_5968	0.49	-0.7
6,787,133	+		Pf6N2E2_5968	0.49	+0.3
6,787,133	+		Pf6N2E2_5968	0.49	+0.3
6,787,134	-		Pf6N2E2_5968	0.49	-0.2
6,787,134	-		Pf6N2E2_5968	0.49	-0.7
6,787,151	+		Pf6N2E2_5968	0.51	-1.0
6,787,151	+		Pf6N2E2_5968	0.51	-1.3
6,787,151	+		Pf6N2E2_5968	0.51	-0.7
6,787,151	+		Pf6N2E2_5968	0.51	-0.7
6,787,151	+		Pf6N2E2_5968	0.51	+0.3
6,787,151	+		Pf6N2E2_5968	0.51	-0.7
6,787,152	-		Pf6N2E2_5968	0.51	-0.7
6,787,152	-		Pf6N2E2_5968	0.51	+0.3
6,787,152	-		Pf6N2E2_5968	0.51	-1.3
6,787,152	-		Pf6N2E2_5968	0.51	+0.3
6,787,152	-		Pf6N2E2_5968	0.51	-0.7
6,787,152	-		Pf6N2E2_5968	0.51	-0.7
6,787,152	-		Pf6N2E2_5968	0.51	+0.3
6,787,154	-		Pf6N2E2_5968	0.51	-0.7
6,787,238	+		Pf6N2E2_5968	0.59	-1.3
6,787,238	+		Pf6N2E2_5968	0.59	+0.3
6,787,239	-		Pf6N2E2_5968	0.60	-1.3
6,787,239	-		Pf6N2E2_5968	0.60	-0.7
6,787,508	+		Pf6N2E2_5968	0.86	+0.3
6,787,509	-		Pf6N2E2_5968	0.86	-1.7
6,787,509	-		Pf6N2E2_5968	0.86	-1.2
6,787,529	+		Pf6N2E2_5968	0.88	-0.4
6,787,529	+		Pf6N2E2_5968	0.88	+0.3
6,787,529	+		Pf6N2E2_5968	0.88	-0.7
6,787,529	+		Pf6N2E2_5968	0.88	-0.7
6,787,529	+		Pf6N2E2_5968	0.88	+0.3
6,787,530	-		Pf6N2E2_5968	0.88	-0.8
6,787,530	-		Pf6N2E2_5968	0.88	-0.5
6,787,530	-		Pf6N2E2_5968	0.88	+0.7
6,787,530	-		Pf6N2E2_5968	0.88	-0.4
6,787,530	-		Pf6N2E2_5968	0.88	+0.3
6,787,565	+				+0.3
6,787,565	+				-1.9
6,787,566	-				+0.2
6,787,566	-				-1.3
6,787,566	-				+0.3
6,787,705	+				+0.3
6,787,705	+				-0.2
6,787,706	-				+0.3
6,787,706	-				+0.3
6,787,706	-				-0.1
6,787,720	+				+0.3
6,787,720	+				-0.7
6,787,913	+		Pf6N2E2_5969	0.12	-1.3
6,787,913	+		Pf6N2E2_5969	0.12	-1.3
6,787,913	+		Pf6N2E2_5969	0.12	-0.7
6,787,913	+		Pf6N2E2_5969	0.12	-0.6
6,787,913	+		Pf6N2E2_5969	0.12	-1.5
6,787,913	+		Pf6N2E2_5969	0.12	-0.7
6,787,913	+		Pf6N2E2_5969	0.12	-1.0
6,787,914	-		Pf6N2E2_5969	0.12	+0.3
6,787,914	-		Pf6N2E2_5969	0.12	-0.4
6,787,914	-		Pf6N2E2_5969	0.12	+0.3
6,787,914	-		Pf6N2E2_5969	0.12	-0.7
6,787,914	-		Pf6N2E2_5969	0.12	-2.0
6,788,197	-		Pf6N2E2_5969	0.31	-1.9
6,788,336	+		Pf6N2E2_5969	0.40	+0.3
6,788,337	-		Pf6N2E2_5969	0.40	-0.7
6,788,405	+		Pf6N2E2_5969	0.44	+0.3
6,788,405	+		Pf6N2E2_5969	0.44	-0.3
6,788,406	-		Pf6N2E2_5969	0.44	+0.3
6,788,489	+		Pf6N2E2_5969	0.50	-0.7
6,788,489	+		Pf6N2E2_5969	0.50	-0.7
6,788,489	+		Pf6N2E2_5969	0.50	-1.0
6,788,489	+		Pf6N2E2_5969	0.50	+0.3
6,788,489	+		Pf6N2E2_5969	0.50	-0.8
6,788,489	+		Pf6N2E2_5969	0.50	+0.3
6,788,489	+		Pf6N2E2_5969	0.50	-0.9
6,788,489	+		Pf6N2E2_5969	0.50	-1.3
6,788,489	+		Pf6N2E2_5969	0.50	+0.3
6,788,489	+		Pf6N2E2_5969	0.50	-1.7
6,788,489	+		Pf6N2E2_5969	0.50	-0.7
6,788,489	+		Pf6N2E2_5969	0.50	+0.3
6,788,489	+		Pf6N2E2_5969	0.50	-1.7
6,788,489	+		Pf6N2E2_5969	0.50	+0.3
6,788,489	+		Pf6N2E2_5969	0.50	-0.6
6,788,489	+		Pf6N2E2_5969	0.50	+0.3
6,788,489	+		Pf6N2E2_5969	0.50	+0.3
6,788,489	+		Pf6N2E2_5969	0.50	-0.7
6,788,489	+		Pf6N2E2_5969	0.50	-1.5
6,788,489	+		Pf6N2E2_5969	0.50	+0.3
6,788,489	+		Pf6N2E2_5969	0.50	+0.3
6,788,489	+		Pf6N2E2_5969	0.50	-1.3
6,788,489	+		Pf6N2E2_5969	0.50	+0.3
6,788,489	+		Pf6N2E2_5969	0.50	+0.3
6,788,489	+		Pf6N2E2_5969	0.50	+0.3
6,788,489	+		Pf6N2E2_5969	0.50	-0.7
6,788,490	-		Pf6N2E2_5969	0.50	-0.7
6,788,490	-		Pf6N2E2_5969	0.50	-0.7
6,788,490	-		Pf6N2E2_5969	0.50	+0.3
6,788,490	-		Pf6N2E2_5969	0.50	-0.7
6,788,490	-		Pf6N2E2_5969	0.50	-0.7
6,788,490	-		Pf6N2E2_5969	0.50	-1.6
6,788,490	-		Pf6N2E2_5969	0.50	+0.3
6,788,490	-		Pf6N2E2_5969	0.50	+0.3
6,788,490	-		Pf6N2E2_5969	0.50	-0.9
6,788,490	-		Pf6N2E2_5969	0.50	+0.3
6,788,490	-		Pf6N2E2_5969	0.50	+0.3
6,788,490	-		Pf6N2E2_5969	0.50	+0.3
6,788,490	-		Pf6N2E2_5969	0.50	-0.9
6,788,490	-		Pf6N2E2_5969	0.50	-2.5
6,788,490	-		Pf6N2E2_5969	0.50	-0.6
6,788,490	-		Pf6N2E2_5969	0.50	-1.3
6,788,490	-		Pf6N2E2_5969	0.50	-1.7
6,788,490	-		Pf6N2E2_5969	0.50	+0.3
6,788,490	-		Pf6N2E2_5969	0.50	+0.3
6,788,496	-		Pf6N2E2_5969	0.50	-1.0
6,788,939	+		Pf6N2E2_5969	0.79	+0.3
6,788,939	+		Pf6N2E2_5969	0.79	-0.8
6,788,939	+		Pf6N2E2_5969	0.79	+0.3
6,788,939	+		Pf6N2E2_5969	0.79	+0.3
6,788,940	-		Pf6N2E2_5969	0.79	-0.7
6,788,940	-		Pf6N2E2_5969	0.79	+0.3
6,788,940	-		Pf6N2E2_5969	0.79	+0.3
6,788,940	-		Pf6N2E2_5969	0.79	+0.3
6,788,940	-		Pf6N2E2_5969	0.79	+0.3
6,789,022	+		Pf6N2E2_5969	0.84	+0.3
6,789,022	+		Pf6N2E2_5969	0.84	+0.3
6,789,059	+		Pf6N2E2_5969	0.87	+0.3
6,789,059	+		Pf6N2E2_5969	0.87	+0.3
6,789,060	-		Pf6N2E2_5969	0.87	+0.3
6,789,270	+				-0.4
6,789,270	+				+0.3
6,789,270	+				-0.2
6,789,270	+				+0.3
6,789,271	-				+0.3
6,789,271	-				+0.3
6,789,480	+		Pf6N2E2_5970	0.21	-1.7
6,789,480	+		Pf6N2E2_5970	0.21	-0.6
6,789,480	+		Pf6N2E2_5970	0.21	-0.7
6,789,481	-		Pf6N2E2_5970	0.21	-0.7
6,789,481	-		Pf6N2E2_5970	0.21	-0.7
6,789,481	-		Pf6N2E2_5970	0.21	+0.3
6,789,481	-		Pf6N2E2_5970	0.21	+0.3
6,789,481	-		Pf6N2E2_5970	0.21	-0.7
6,789,481	-		Pf6N2E2_5970	0.21	-0.8
6,789,671	+		Pf6N2E2_5970	0.41	+0.3
6,789,711	+		Pf6N2E2_5970	0.45	-0.7
6,789,711	+		Pf6N2E2_5970	0.45	+0.3
6,789,711	+		Pf6N2E2_5970	0.45	-0.5
6,789,712	-		Pf6N2E2_5970	0.45	-1.7
6,789,712	-		Pf6N2E2_5970	0.45	+0.3
6,789,712	-		Pf6N2E2_5970	0.45	-1.3
6,789,728	+		Pf6N2E2_5970	0.47	-0.6
6,789,849	+		Pf6N2E2_5970	0.59	+0.3
6,789,849	+		Pf6N2E2_5970	0.59	+0.3
6,789,849	+		Pf6N2E2_5970	0.59	+0.3
6,789,849	+		Pf6N2E2_5970	0.59	-0.3
6,789,850	-		Pf6N2E2_5970	0.59	-0.5
6,789,850	-		Pf6N2E2_5970	0.59	+0.3
6,789,850	-		Pf6N2E2_5970	0.59	-0.0
6,789,858	+		Pf6N2E2_5970	0.60	-0.5
6,789,858	+		Pf6N2E2_5970	0.60	+0.3
6,789,859	-		Pf6N2E2_5970	0.60	+0.3
6,789,859	-		Pf6N2E2_5970	0.60	+0.3
6,789,952	+		Pf6N2E2_5970	0.70	+0.3
6,789,952	+		Pf6N2E2_5970	0.70	-0.7
6,790,176	+				+0.5
6,790,176	+				-0.6
6,790,176	+				-0.7
6,790,176	+				-0.7
6,790,177	-				+0.3
6,790,177	-				+0.3
6,790,177	-				-0.7
6,790,182	+				-1.3
6,790,182	+				-0.7
6,790,182	+				-0.7
6,790,182	+				+0.3
6,790,182	+				-1.7
6,790,183	-				-0.7
6,790,183	-				+0.3
6,790,183	-				-0.7