Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5467

Experiment: Ying_OrganicAcid7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 3
6,281,302	+		Pf6N2E2_5466	0.72	+0.4
6,281,302	+		Pf6N2E2_5466	0.72	-0.9
6,281,302	+		Pf6N2E2_5466	0.72	-0.6
6,281,302	+		Pf6N2E2_5466	0.72	+0.4
6,281,302	+		Pf6N2E2_5466	0.72	-1.7
6,281,302	+		Pf6N2E2_5466	0.72	-0.6
6,281,302	+		Pf6N2E2_5466	0.72	+0.4
6,281,302	+		Pf6N2E2_5466	0.72	-0.6
6,281,302	+		Pf6N2E2_5466	0.72	-1.2
6,281,302	+		Pf6N2E2_5466	0.72	-0.7
6,281,302	+		Pf6N2E2_5466	0.72	+0.4
6,281,302	+		Pf6N2E2_5466	0.72	-0.6
6,281,302	+		Pf6N2E2_5466	0.72	+0.4
6,281,302	+		Pf6N2E2_5466	0.72	-0.6
6,281,303	-		Pf6N2E2_5466	0.72	-1.8
6,281,303	-		Pf6N2E2_5466	0.72	+0.4
6,281,303	-		Pf6N2E2_5466	0.72	+0.4
6,281,303	-		Pf6N2E2_5466	0.72	-1.6
6,281,303	-		Pf6N2E2_5466	0.72	-0.6
6,281,303	-		Pf6N2E2_5466	0.72	-0.6
6,281,303	-		Pf6N2E2_5466	0.72	+0.4
6,281,303	-		Pf6N2E2_5466	0.72	+0.4
6,281,303	-		Pf6N2E2_5466	0.72	+0.4
6,281,303	-		Pf6N2E2_5466	0.72	+0.4
6,281,303	-		Pf6N2E2_5466	0.72	+0.4
6,281,303	-		Pf6N2E2_5466	0.72	+0.4
6,281,303	-		Pf6N2E2_5466	0.72	+0.4
6,281,471	+		Pf6N2E2_5466	0.80	-1.9
6,281,471	+		Pf6N2E2_5466	0.80	-2.1
6,281,570	-		Pf6N2E2_5466	0.84	+0.4
6,281,570	-		Pf6N2E2_5466	0.84	+0.4
6,281,570	-		Pf6N2E2_5466	0.84	+0.4
6,281,913	-				-0.6
6,281,913	-				+0.4
6,281,918	+				+0.4
6,281,919	-				-0.6
6,281,964	+				+0.4
6,281,964	+				-0.6
6,281,964	+				-0.6
6,281,964	+				-1.2
6,281,964	+				-1.2
6,281,964	+				+0.4
6,281,964	+				+0.4
6,281,964	+				+0.4
6,281,965	-				-1.6
6,281,965	-				-0.6
6,281,965	-				-0.6
6,281,965	-				+0.4
6,281,965	-				-0.6
6,281,965	-				+0.4
6,281,965	-				-0.6
6,281,965	-				+0.4
6,281,965	-				-1.7
6,281,965	-				-1.9
6,281,965	-				+0.4
6,281,985	+				+0.4
6,282,006	+				-0.6
6,282,006	+				+0.4
6,282,006	+				-1.6
6,282,006	+				+0.4
6,282,007	-				+0.4
6,282,007	-				-1.9
6,282,017	+				-1.6
6,282,017	+				-0.6
6,282,017	+				-0.3
6,282,017	+				+0.4
6,282,017	+				+1.0
6,282,017	+				-1.2
6,282,018	-				+0.4
6,282,018	-				-0.6
6,282,018	-				-1.2
6,282,018	-				+0.4
6,282,018	-				-0.6
6,282,018	-				+1.4
6,282,018	-				-1.2
6,282,018	-				-1.4
6,282,018	-				-1.3
6,282,036	+				-0.6
6,282,036	+				-1.6
6,282,037	-				-1.2
6,282,037	-				-0.6
6,282,037	-				+0.4
6,282,043	+				-1.2
6,282,043	+				+0.4
6,282,043	+				-1.2
6,282,043	+				+0.4
6,282,043	+				-0.5
6,282,044	-				-1.2
6,282,044	-				+0.4
6,282,104	+				-0.6
6,282,105	-				+0.4
6,282,107	+				+0.4
6,282,108	-				-1.2
6,282,114	+				+0.4
6,282,114	+				+0.4
6,282,126	-				-0.6
6,282,130	+				-0.9
6,282,130	+				-0.8
6,282,130	+				+0.4
6,282,131	-				+0.4
6,282,131	-				-0.6
6,282,131	-				-1.2
6,282,131	-				+0.4
6,282,148	+				+0.4
6,282,149	-				-1.8
6,282,149	-				-1.2
6,282,241	+				-1.0
6,282,241	+				-2.1
6,282,258	+				+0.4
6,282,258	+				+0.4
6,282,259	-				+0.4
6,282,272	+				-2.5
6,282,408	-		Pf6N2E2_5467	0.18	-0.6
6,282,408	-		Pf6N2E2_5467	0.18	+0.4
6,282,704	+		Pf6N2E2_5467	0.39	+0.4
6,282,705	-		Pf6N2E2_5467	0.40	-1.5
6,282,725	+		Pf6N2E2_5467	0.41	+0.4
6,282,725	+		Pf6N2E2_5467	0.41	-1.2
6,282,725	+		Pf6N2E2_5467	0.41	-0.6
6,282,725	+		Pf6N2E2_5467	0.41	+0.4
6,282,725	+		Pf6N2E2_5467	0.41	-0.6
6,282,726	-		Pf6N2E2_5467	0.41	+0.4
6,282,821	+		Pf6N2E2_5467	0.48	+0.4
6,282,821	+		Pf6N2E2_5467	0.48	-0.6
6,282,822	-		Pf6N2E2_5467	0.48	-2.2
6,282,822	-		Pf6N2E2_5467	0.48	+0.4
6,282,822	-		Pf6N2E2_5467	0.48	-1.4
6,282,824	-		Pf6N2E2_5467	0.48	-1.3
6,282,884	+		Pf6N2E2_5467	0.53	-0.6
6,282,884	+		Pf6N2E2_5467	0.53	-0.6
6,282,885	-		Pf6N2E2_5467	0.53	-0.6
6,282,966	-		Pf6N2E2_5467	0.59	-1.9
6,283,202	+		Pf6N2E2_5467	0.76	-1.8
6,283,202	+		Pf6N2E2_5467	0.76	+0.4
6,283,202	+		Pf6N2E2_5467	0.76	+0.4
6,283,202	+		Pf6N2E2_5467	0.76	+0.4
6,283,203	-		Pf6N2E2_5467	0.76	+0.4
6,283,214	+		Pf6N2E2_5467	0.77	-0.6
6,283,214	+		Pf6N2E2_5467	0.77	+0.4
6,283,229	+		Pf6N2E2_5467	0.78	+0.4
6,283,275	-		Pf6N2E2_5467	0.81	-1.9
6,283,275	-		Pf6N2E2_5467	0.81	+0.4
6,283,685	+				+0.4
6,283,685	+				-0.2
6,283,685	+				-0.3
6,283,685	+				-0.2
6,283,686	-				-0.6
6,283,691	+				-0.6
6,283,692	-				+0.4
6,283,692	-				-1.2
6,283,763	-				-1.2
6,283,763	-				-0.8
6,283,976	-		Pf6N2E2_5468	0.41	+1.5
6,284,046	-		Pf6N2E2_5468	0.58	-0.8
6,284,062	+		Pf6N2E2_5468	0.62	-0.5
6,284,191	-				+0.4
6,284,206	+				-0.3
6,284,206	+				-0.6
6,284,206	+				-1.2
6,284,207	-				-0.6
6,284,207	-				-0.6
6,284,207	-				+0.4
6,284,207	-				-0.6
6,284,207	-				+0.4
6,284,210	+				-0.6
6,284,211	-				-0.6
6,284,211	-				-0.6
6,284,211	-				+0.4
6,284,211	-				-0.7
6,284,297	-				+0.4
6,284,297	-				+0.4
6,284,322	+		Pf6N2E2_5469	0.12	+0.4
6,284,322	+		Pf6N2E2_5469	0.12	-0.6
6,284,322	+		Pf6N2E2_5469	0.12	+2.4
6,284,322	+		Pf6N2E2_5469	0.12	-1.6
6,284,322	+		Pf6N2E2_5469	0.12	+0.4
6,284,322	+		Pf6N2E2_5469	0.12	+0.4
6,284,323	-		Pf6N2E2_5469	0.12	-0.7
6,284,323	-		Pf6N2E2_5469	0.12	+0.4
6,284,323	-		Pf6N2E2_5469	0.12	-0.2
6,284,323	-		Pf6N2E2_5469	0.12	-1.9
6,284,461	-		Pf6N2E2_5469	0.34	-1.4
6,284,467	+		Pf6N2E2_5469	0.35	+0.4
6,284,467	+		Pf6N2E2_5469	0.35	-0.2