Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4346

Experiment: Ying_OrganicAcid7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 3
5,072,216	+				-0.5
5,072,405	+				+0.5
5,072,405	+				-0.5
5,072,405	+				+0.5
5,072,406	-				+1.1
5,072,406	-				-0.4
5,072,406	-				-0.7
5,072,406	-				-1.1
5,072,475	+				-0.5
5,072,485	+				+1.3
5,072,565	+		Pf6N2E2_4345	0.18	-0.5
5,072,565	+		Pf6N2E2_4345	0.18	-0.5
5,072,565	+		Pf6N2E2_4345	0.18	-0.1
5,072,566	-		Pf6N2E2_4345	0.18	+0.9
5,072,566	-		Pf6N2E2_4345	0.18	+0.8
5,072,716	+		Pf6N2E2_4345	0.39	-0.8
5,072,717	-		Pf6N2E2_4345	0.39	-0.8
5,072,717	-		Pf6N2E2_4345	0.39	-0.5
5,072,717	-		Pf6N2E2_4345	0.39	+0.5
5,072,839	-		Pf6N2E2_4345	0.56	+0.5
5,073,664	+		Pf6N2E2_4346	0.43	-1.1
5,073,664	+		Pf6N2E2_4346	0.43	-0.8
5,073,664	+		Pf6N2E2_4346	0.43	-0.5
5,073,664	+		Pf6N2E2_4346	0.43	-0.5
5,073,664	+		Pf6N2E2_4346	0.43	-0.5
5,073,665	-		Pf6N2E2_4346	0.43	+0.5
5,073,834	+		Pf6N2E2_4346	0.57	-0.5
5,073,834	+		Pf6N2E2_4346	0.57	+0.5
5,073,834	+		Pf6N2E2_4346	0.57	-1.1
5,073,834	+		Pf6N2E2_4346	0.57	-1.1
5,073,834	+		Pf6N2E2_4346	0.57	+0.5
5,073,835	-		Pf6N2E2_4346	0.57	-0.5
5,073,835	-		Pf6N2E2_4346	0.57	-0.5
5,073,873	+		Pf6N2E2_4346	0.60	-0.5
5,074,038	-		Pf6N2E2_4346	0.74	-1.2
5,074,119	+		Pf6N2E2_4346	0.81	-1.1
5,074,119	+		Pf6N2E2_4346	0.81	-0.9
5,074,120	-		Pf6N2E2_4346	0.81	-1.1
5,074,120	-		Pf6N2E2_4346	0.81	+0.5
5,074,120	-		Pf6N2E2_4346	0.81	+0.5
5,074,120	-		Pf6N2E2_4346	0.81	-0.5
5,074,159	-		Pf6N2E2_4346	0.84	+0.1
5,074,189	+		Pf6N2E2_4346	0.87	+0.5
5,074,189	+		Pf6N2E2_4346	0.87	-0.5
5,074,190	-		Pf6N2E2_4346	0.87	+0.5
5,074,213	-		Pf6N2E2_4346	0.89	-0.5
5,074,239	+				+0.5
5,074,239	+				-0.5
5,074,342	+				-2.1
5,074,342	+				+0.2
5,074,342	+				-0.5
5,074,342	+				-0.5
5,074,343	-				-0.7
5,074,343	-				+1.5
5,074,343	-				+0.1
5,074,343	-				-1.1
5,074,344	+				-0.3
5,074,344	+				-1.1
5,074,344	+				-0.5
5,074,344	+				-0.5
5,074,344	+				+0.5
5,074,344	+				+0.5
5,074,344	+				-1.8
5,074,344	+				-1.5
5,074,345	-				+1.5
5,074,345	-				+0.5
5,074,345	-				-1.5
5,074,345	-				-1.1
5,074,345	-				-0.5
5,074,345	-				+0.5
5,074,345	-				-0.5
5,074,349	+				+0.5
5,074,349	+				-0.5
5,074,492	+				-1.8
5,074,492	+				+0.5
5,074,492	+				-0.5
5,074,492	+				-1.6
5,074,492	+				+0.5
5,074,492	+				-0.5
5,074,493	-				+0.5
5,074,493	-				-0.5
5,074,493	-				-1.1
5,074,493	-				-2.1
5,074,493	-				-1.1
5,074,711	+		Pf6N2E2_4347	0.22	-1.5
5,074,711	+		Pf6N2E2_4347	0.22	+0.5
5,074,711	+		Pf6N2E2_4347	0.22	-0.5
5,074,711	+		Pf6N2E2_4347	0.22	-0.3
5,074,712	-		Pf6N2E2_4347	0.22	-0.3
5,074,712	-		Pf6N2E2_4347	0.22	-1.2
5,074,712	-		Pf6N2E2_4347	0.22	+0.5
5,074,712	-		Pf6N2E2_4347	0.22	-1.1
5,074,712	-		Pf6N2E2_4347	0.22	-0.1
5,074,712	-		Pf6N2E2_4347	0.22	+0.0
5,074,726	+		Pf6N2E2_4347	0.22	+0.5
5,074,727	-		Pf6N2E2_4347	0.22	+0.0
5,074,727	-		Pf6N2E2_4347	0.22	-1.5
5,074,727	-		Pf6N2E2_4347	0.22	+0.5
5,074,747	+		Pf6N2E2_4347	0.24	-1.5
5,074,900	+		Pf6N2E2_4347	0.32	-0.5
5,074,900	+		Pf6N2E2_4347	0.32	+0.5
5,074,901	-		Pf6N2E2_4347	0.33	-1.1
5,074,901	-		Pf6N2E2_4347	0.33	-0.5
5,074,901	-		Pf6N2E2_4347	0.33	-0.3
5,074,922	-		Pf6N2E2_4347	0.34	-1.1
5,074,922	-		Pf6N2E2_4347	0.34	-0.5
5,075,317	+		Pf6N2E2_4347	0.57	-1.1
5,075,318	-		Pf6N2E2_4347	0.57	-0.5
5,075,318	-		Pf6N2E2_4347	0.57	+0.8