Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4039

Experiment: Ying_OrganicAcid7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 3
4,719,673	+		Pf6N2E2_4038	0.21	-1.1
4,719,673	+		Pf6N2E2_4038	0.21	-1.1
4,719,673	+		Pf6N2E2_4038	0.21	-0.4
4,719,673	+		Pf6N2E2_4038	0.21	-1.5
4,719,674	-		Pf6N2E2_4038	0.21	-0.5
4,719,674	-		Pf6N2E2_4038	0.21	+0.5
4,719,674	-		Pf6N2E2_4038	0.21	+0.5
4,719,674	-		Pf6N2E2_4038	0.21	+2.1
4,719,674	-		Pf6N2E2_4038	0.21	-0.8
4,719,849	+		Pf6N2E2_4038	0.35	+0.5
4,719,849	+		Pf6N2E2_4038	0.35	-0.5
4,719,850	-		Pf6N2E2_4038	0.35	+0.5
4,719,850	-		Pf6N2E2_4038	0.35	-1.6
4,719,852	+		Pf6N2E2_4038	0.35	-1.1
4,719,853	-		Pf6N2E2_4038	0.35	-0.5
4,719,882	+		Pf6N2E2_4038	0.38	+2.1
4,719,883	-		Pf6N2E2_4038	0.38	-0.5
4,719,883	-		Pf6N2E2_4038	0.38	-0.5
4,719,883	-		Pf6N2E2_4038	0.38	+0.5
4,719,883	-		Pf6N2E2_4038	0.38	-0.5
4,719,938	-		Pf6N2E2_4038	0.42	+0.5
4,719,938	-		Pf6N2E2_4038	0.42	-0.5
4,720,169	-		Pf6N2E2_4038	0.61	-1.4
4,720,169	-		Pf6N2E2_4038	0.61	-1.1
4,720,213	+		Pf6N2E2_4038	0.65	-1.1
4,720,407	+		Pf6N2E2_4038	0.80	-0.5
4,720,408	-		Pf6N2E2_4038	0.80	-0.5
4,720,514	-		Pf6N2E2_4038	0.89	-1.1
4,720,514	-		Pf6N2E2_4038	0.89	-0.4
4,720,514	-		Pf6N2E2_4038	0.89	-1.1
4,720,514	-		Pf6N2E2_4038	0.89	-0.5
4,720,635	+				-0.5
4,720,636	-				-0.5
4,720,674	+				-0.3
4,720,674	+				-0.5
4,720,674	+				+0.5
4,720,674	+				-0.5
4,720,674	+				-0.0
4,720,675	-				-0.8
4,720,675	-				+0.5
4,720,675	-				-0.5
4,720,675	-				+0.5
4,720,675	-				-2.5
4,720,675	-				-1.1
4,720,675	-				-0.5
4,720,675	-				+0.5
4,720,675	-				+0.5
4,720,675	-				+0.5
4,720,675	-				-1.0
4,720,690	+				-0.9
4,720,690	+				+0.5
4,720,690	+				-1.1
4,720,690	+				+0.5
4,720,690	+				-1.8
4,720,690	+				-1.1
4,720,690	+				+0.5
4,720,690	+				+0.5
4,720,691	-				-0.7
4,720,691	-				+0.5
4,720,691	-				-0.5
4,720,691	-				-0.5
4,720,691	-				+0.5
4,720,691	-				-1.1
4,720,691	-				+0.5
4,720,691	-				+0.5
4,720,691	-				-1.1
4,720,691	-				-0.5
4,720,691	-				-1.0
4,720,691	-				+0.5
4,720,691	-				+0.5
4,720,720	+		Pf6N2E2_4039	0.18	-1.0
4,720,720	+		Pf6N2E2_4039	0.18	+0.5
4,720,720	+		Pf6N2E2_4039	0.18	+0.5
4,720,721	-		Pf6N2E2_4039	0.18	-0.5
4,720,721	-		Pf6N2E2_4039	0.18	+0.5
4,720,721	-		Pf6N2E2_4039	0.18	+0.5
4,720,721	-		Pf6N2E2_4039	0.18	-0.5
4,720,721	-		Pf6N2E2_4039	0.18	+0.5
4,720,721	-		Pf6N2E2_4039	0.18	-1.1
4,720,721	-		Pf6N2E2_4039	0.18	+0.5
4,720,721	-		Pf6N2E2_4039	0.18	-0.9
4,720,729	+		Pf6N2E2_4039	0.20	-1.1
4,720,984	+				-0.9
4,720,984	+				-1.1
4,720,984	+				+0.5
4,720,984	+				+0.5
4,720,984	+				-1.1
4,720,984	+				-0.5
4,720,985	-				-0.5
4,720,985	-				-0.5
4,720,985	-				-0.5
4,720,985	-				-1.5
4,720,985	-				+0.5
4,720,985	-				-1.5
4,720,985	-				+0.5
4,720,985	-				-1.0
4,721,013	+				+0.5
4,721,013	+				-0.5
4,721,014	-				-0.5
4,721,014	-				-0.8
4,721,138	+		Pf6N2E2_4040	0.11	+0.5
4,721,138	+		Pf6N2E2_4040	0.11	-1.7
4,721,138	+		Pf6N2E2_4040	0.11	-1.2
4,721,138	+		Pf6N2E2_4040	0.11	-2.1
4,721,138	+		Pf6N2E2_4040	0.11	-0.5
4,721,139	-		Pf6N2E2_4040	0.11	-0.9
4,721,139	-		Pf6N2E2_4040	0.11	-1.5
4,721,139	-		Pf6N2E2_4040	0.11	-1.1
4,721,139	-		Pf6N2E2_4040	0.11	-0.5
4,721,142	+		Pf6N2E2_4040	0.11	-1.6
4,721,142	+		Pf6N2E2_4040	0.11	+0.0
4,721,142	+		Pf6N2E2_4040	0.11	-1.1
4,721,142	+		Pf6N2E2_4040	0.11	-1.1
4,721,142	+		Pf6N2E2_4040	0.11	-1.7
4,721,142	+		Pf6N2E2_4040	0.11	-1.1
4,721,142	+		Pf6N2E2_4040	0.11	-0.5
4,721,142	+		Pf6N2E2_4040	0.11	-1.5
4,721,142	+		Pf6N2E2_4040	0.11	-1.5
4,721,142	+		Pf6N2E2_4040	0.11	-0.5
4,721,142	+		Pf6N2E2_4040	0.11	+0.5
4,721,142	+		Pf6N2E2_4040	0.11	-0.5
4,721,142	+		Pf6N2E2_4040	0.11	-1.5
4,721,142	+		Pf6N2E2_4040	0.11	-1.8
4,721,142	+		Pf6N2E2_4040	0.11	-1.0
4,721,143	-		Pf6N2E2_4040	0.11	+0.1
4,721,143	-		Pf6N2E2_4040	0.11	+0.5
4,721,143	-		Pf6N2E2_4040	0.11	+0.5
4,721,143	-		Pf6N2E2_4040	0.11	-1.1
4,721,143	-		Pf6N2E2_4040	0.11	-0.5
4,721,143	-		Pf6N2E2_4040	0.11	-0.5
4,721,143	-		Pf6N2E2_4040	0.11	-0.8
4,721,143	-		Pf6N2E2_4040	0.11	-0.5
4,721,144	+		Pf6N2E2_4040	0.11	-0.5
4,721,144	+		Pf6N2E2_4040	0.11	-0.6
4,721,144	+		Pf6N2E2_4040	0.11	-1.8
4,721,145	-		Pf6N2E2_4040	0.11	+1.5
4,721,145	-		Pf6N2E2_4040	0.11	-0.5
4,721,145	-		Pf6N2E2_4040	0.11	+0.5
4,721,145	-		Pf6N2E2_4040	0.11	-1.0
4,721,469	+		Pf6N2E2_4040	0.34	-1.5
4,721,469	+		Pf6N2E2_4040	0.34	-1.1
4,721,469	+		Pf6N2E2_4040	0.34	+0.5
4,721,469	+		Pf6N2E2_4040	0.34	-1.1
4,721,469	+		Pf6N2E2_4040	0.34	-1.5
4,721,469	+		Pf6N2E2_4040	0.34	+0.2
4,721,469	+		Pf6N2E2_4040	0.34	+0.5
4,721,470	-		Pf6N2E2_4040	0.34	-1.1
4,721,470	-		Pf6N2E2_4040	0.34	-1.5
4,721,470	-		Pf6N2E2_4040	0.34	-0.6
4,721,470	-		Pf6N2E2_4040	0.34	+0.5
4,721,470	-		Pf6N2E2_4040	0.34	+0.5
4,721,470	-		Pf6N2E2_4040	0.34	-0.5
4,721,470	-		Pf6N2E2_4040	0.34	-1.5
4,721,501	-		Pf6N2E2_4040	0.36	-2.1
4,721,694	+		Pf6N2E2_4040	0.49	-0.5
4,721,694	+		Pf6N2E2_4040	0.49	-1.8
4,721,695	-		Pf6N2E2_4040	0.49	+0.5
4,721,695	-		Pf6N2E2_4040	0.49	-1.1
4,721,695	-		Pf6N2E2_4040	0.49	-1.1
4,721,793	+		Pf6N2E2_4040	0.56	-0.5
4,721,793	+		Pf6N2E2_4040	0.56	-0.5
4,721,793	+		Pf6N2E2_4040	0.56	-1.5
4,721,793	+		Pf6N2E2_4040	0.56	-0.5
4,721,793	+		Pf6N2E2_4040	0.56	+0.5
4,721,793	+		Pf6N2E2_4040	0.56	-0.5
4,721,793	+		Pf6N2E2_4040	0.56	-0.5
4,721,793	+		Pf6N2E2_4040	0.56	-1.6
4,721,793	+		Pf6N2E2_4040	0.56	+0.5
4,721,794	-		Pf6N2E2_4040	0.56	-0.2
4,721,794	-		Pf6N2E2_4040	0.56	+0.5
4,721,794	-		Pf6N2E2_4040	0.56	+0.5
4,721,794	-		Pf6N2E2_4040	0.56	+0.5
4,721,794	-		Pf6N2E2_4040	0.56	-1.0
4,721,794	-		Pf6N2E2_4040	0.56	-2.1
4,721,794	-		Pf6N2E2_4040	0.56	-1.8
4,721,794	-		Pf6N2E2_4040	0.56	-1.8
4,721,794	-		Pf6N2E2_4040	0.56	+1.5
4,721,794	-		Pf6N2E2_4040	0.56	+0.5
4,721,794	-		Pf6N2E2_4040	0.56	+0.5
4,721,794	-		Pf6N2E2_4040	0.56	-0.5
4,721,794	-		Pf6N2E2_4040	0.56	-0.5