Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3705

Experiment: Ying_OrganicAcid7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 3
4,318,174	-		Pf6N2E2_3703	0.90	-0.8
4,318,284	+				-0.5
4,318,378	+				-0.5
4,318,378	+				-0.5
4,318,379	-				+0.5
4,318,593	+		Pf6N2E2_3704	0.36	-0.4
4,318,593	+		Pf6N2E2_3704	0.36	-0.5
4,318,593	+		Pf6N2E2_3704	0.36	-1.8
4,318,624	+		Pf6N2E2_3704	0.40	-1.8
4,318,648	+		Pf6N2E2_3704	0.43	+0.5
4,318,648	+		Pf6N2E2_3704	0.43	+0.1
4,318,649	-		Pf6N2E2_3704	0.43	-0.5
4,318,649	-		Pf6N2E2_3704	0.43	-1.3
4,318,649	-		Pf6N2E2_3704	0.43	-1.1
4,318,649	-		Pf6N2E2_3704	0.43	-1.1
4,318,650	+		Pf6N2E2_3704	0.43	+0.5
4,318,650	+		Pf6N2E2_3704	0.43	+0.8
4,318,650	+		Pf6N2E2_3704	0.43	+0.5
4,318,650	+		Pf6N2E2_3704	0.43	+0.5
4,318,650	+		Pf6N2E2_3704	0.43	+0.5
4,318,650	+		Pf6N2E2_3704	0.43	-1.5
4,318,650	+		Pf6N2E2_3704	0.43	-0.5
4,318,651	-		Pf6N2E2_3704	0.43	-1.3
4,318,651	-		Pf6N2E2_3704	0.43	+0.5
4,318,651	-		Pf6N2E2_3704	0.43	-1.1
4,318,702	+		Pf6N2E2_3704	0.50	+0.5
4,318,702	+		Pf6N2E2_3704	0.50	-1.3
4,318,702	+		Pf6N2E2_3704	0.50	-0.6
4,318,703	-		Pf6N2E2_3704	0.50	-0.3
4,318,703	-		Pf6N2E2_3704	0.50	-0.5
4,318,703	-		Pf6N2E2_3704	0.50	-0.4
4,318,703	-		Pf6N2E2_3704	0.50	-0.9
4,318,981	+		Pf6N2E2_3704	0.87	-0.6
4,318,982	-		Pf6N2E2_3704	0.87	+0.5
4,318,982	-		Pf6N2E2_3704	0.87	+0.5
4,319,014	+				+0.5
4,319,014	+				-0.5
4,319,094	+				-0.5
4,319,094	+				+0.5
4,319,094	+				+2.1
4,319,094	+				-0.6
4,319,094	+				-0.7
4,319,094	+				-1.1
4,319,095	-				-0.2
4,319,095	-				-0.5
4,319,095	-				-0.5
4,319,095	-				-1.1
4,319,095	-				+0.5
4,319,172	+				+0.5
4,319,334	+		Pf6N2E2_3705	0.18	+0.5
4,319,367	+		Pf6N2E2_3705	0.20	-0.2
4,319,509	-		Pf6N2E2_3705	0.31	-0.4
4,319,560	+		Pf6N2E2_3705	0.35	+0.5
4,319,560	+		Pf6N2E2_3705	0.35	-1.1
4,319,560	+		Pf6N2E2_3705	0.35	-0.5
4,319,560	+		Pf6N2E2_3705	0.35	+0.5
4,319,561	-		Pf6N2E2_3705	0.35	-0.5
4,319,561	-		Pf6N2E2_3705	0.35	+0.5
4,319,561	-		Pf6N2E2_3705	0.35	+0.1
4,319,561	-		Pf6N2E2_3705	0.35	-0.5
4,319,561	-		Pf6N2E2_3705	0.35	-0.7
4,319,712	+		Pf6N2E2_3705	0.46	-0.5
4,319,713	-		Pf6N2E2_3705	0.46	+0.3
4,319,713	-		Pf6N2E2_3705	0.46	-0.5
4,319,724	+		Pf6N2E2_3705	0.47	-0.5
4,319,724	+		Pf6N2E2_3705	0.47	-0.5
4,319,724	+		Pf6N2E2_3705	0.47	-1.1
4,319,725	-		Pf6N2E2_3705	0.47	-1.1
4,319,725	-		Pf6N2E2_3705	0.47	+0.5
4,319,866	+		Pf6N2E2_3705	0.58	+0.5
4,319,961	+		Pf6N2E2_3705	0.65	-0.2
4,319,961	+		Pf6N2E2_3705	0.65	-0.5
4,319,961	+		Pf6N2E2_3705	0.65	+0.5
4,319,961	+		Pf6N2E2_3705	0.65	+0.0
4,319,962	-		Pf6N2E2_3705	0.65	-0.3
4,319,962	-		Pf6N2E2_3705	0.65	-0.5
4,319,962	-		Pf6N2E2_3705	0.65	+0.5
4,319,962	-		Pf6N2E2_3705	0.65	+0.3
4,319,962	-		Pf6N2E2_3705	0.65	+0.5
4,320,024	+		Pf6N2E2_3705	0.69	-0.5
4,320,024	+		Pf6N2E2_3705	0.69	+0.5
4,320,024	+		Pf6N2E2_3705	0.69	-0.4
4,320,025	-		Pf6N2E2_3705	0.70	+0.5
4,320,025	-		Pf6N2E2_3705	0.70	-0.1
4,320,025	-		Pf6N2E2_3705	0.70	-0.5
4,320,321	+				-0.1
4,320,423	+				-0.5
4,320,424	-				+0.5
4,320,450	+				+0.2
4,320,450	+				-0.5
4,320,451	-				-1.1
4,320,451	-				-1.1
4,320,451	-				+0.5
4,320,642	+		Pf6N2E2_3706	0.21	+0.5
4,320,753	+		Pf6N2E2_3706	0.33	+0.5
4,320,834	+		Pf6N2E2_3706	0.42	+0.5
4,320,870	+		Pf6N2E2_3706	0.46	-0.5
4,320,870	+		Pf6N2E2_3706	0.46	-0.9
4,320,870	+		Pf6N2E2_3706	0.46	-0.1
4,320,870	+		Pf6N2E2_3706	0.46	+0.5
4,320,870	+		Pf6N2E2_3706	0.46	-0.3
4,320,870	+		Pf6N2E2_3706	0.46	+0.5
4,320,870	+		Pf6N2E2_3706	0.46	-0.5
4,320,871	-		Pf6N2E2_3706	0.46	+0.5
4,320,871	-		Pf6N2E2_3706	0.46	-1.1
4,320,871	-		Pf6N2E2_3706	0.46	-0.5
4,320,871	-		Pf6N2E2_3706	0.46	-0.4
4,320,871	-		Pf6N2E2_3706	0.46	+0.5
4,320,871	-		Pf6N2E2_3706	0.46	+0.5
4,320,871	-		Pf6N2E2_3706	0.46	+0.5
4,320,871	-		Pf6N2E2_3706	0.46	+0.5
4,320,871	-		Pf6N2E2_3706	0.46	+0.5
4,320,873	+		Pf6N2E2_3706	0.47	-1.1
4,320,873	+		Pf6N2E2_3706	0.47	-0.5
4,320,874	-		Pf6N2E2_3706	0.47	+0.5
4,320,874	-		Pf6N2E2_3706	0.47	+0.5
4,320,874	-		Pf6N2E2_3706	0.47	-0.5
4,320,909	+		Pf6N2E2_3706	0.51	+0.3
4,320,909	+		Pf6N2E2_3706	0.51	-0.7
4,320,910	-		Pf6N2E2_3706	0.51	+0.5
4,321,024	+		Pf6N2E2_3706	0.64	+0.5
4,321,078	+		Pf6N2E2_3706	0.70	-0.5
4,321,078	+		Pf6N2E2_3706	0.70	+0.5
4,321,078	+		Pf6N2E2_3706	0.70	+0.5
4,321,079	-		Pf6N2E2_3706	0.70	-0.5
4,321,079	-		Pf6N2E2_3706	0.70	+0.5
4,321,250	-		Pf6N2E2_3706	0.89	-0.1
4,321,250	-		Pf6N2E2_3706	0.89	-0.5
4,321,305	-				-0.4
4,321,331	-				-0.7
4,321,331	-				-1.1
4,321,370	+				-1.8
4,321,371	-				-1.1
4,321,371	-				-1.1