Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2769

Experiment: Ying_OrganicAcid7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 3
3,256,420	+		Pf6N2E2_2768	0.21	-0.7
3,256,420	+		Pf6N2E2_2768	0.21	+0.3
3,256,420	+		Pf6N2E2_2768	0.21	+0.3
3,256,420	+		Pf6N2E2_2768	0.21	-0.3
3,256,420	+		Pf6N2E2_2768	0.21	-0.7
3,256,420	+		Pf6N2E2_2768	0.21	-0.7
3,256,421	-		Pf6N2E2_2768	0.21	+0.3
3,256,421	-		Pf6N2E2_2768	0.21	+0.3
3,256,421	-		Pf6N2E2_2768	0.21	+0.3
3,256,421	-		Pf6N2E2_2768	0.21	+0.3
3,256,421	-		Pf6N2E2_2768	0.21	-0.7
3,256,421	-		Pf6N2E2_2768	0.21	+0.3
3,256,421	-		Pf6N2E2_2768	0.21	-0.7
3,256,421	-		Pf6N2E2_2768	0.21	-0.7
3,256,421	-		Pf6N2E2_2768	0.21	-0.7
3,256,421	-		Pf6N2E2_2768	0.21	-0.3
3,256,450	+		Pf6N2E2_2768	0.24	-1.3
3,256,450	+		Pf6N2E2_2768	0.24	-0.8
3,256,450	+		Pf6N2E2_2768	0.24	-0.2
3,256,594	+		Pf6N2E2_2768	0.38	+0.3
3,256,595	-		Pf6N2E2_2768	0.38	-0.1
3,256,595	-		Pf6N2E2_2768	0.38	+0.3
3,256,649	+		Pf6N2E2_2768	0.44	-0.7
3,256,649	+		Pf6N2E2_2768	0.44	+0.3
3,256,775	-		Pf6N2E2_2768	0.57	+0.3
3,256,775	-		Pf6N2E2_2768	0.57	-0.7
3,256,775	-		Pf6N2E2_2768	0.57	-0.7
3,256,829	+		Pf6N2E2_2768	0.62	+0.3
3,256,829	+		Pf6N2E2_2768	0.62	-1.1
3,256,829	+		Pf6N2E2_2768	0.62	+0.3
3,256,829	+		Pf6N2E2_2768	0.62	-0.7
3,256,829	+		Pf6N2E2_2768	0.62	+0.3
3,256,830	-		Pf6N2E2_2768	0.62	-0.7
3,256,830	-		Pf6N2E2_2768	0.62	-0.5
3,256,830	-				+0.3
3,256,830	-		Pf6N2E2_2768	0.62	+0.3
3,256,830	-		Pf6N2E2_2768	0.62	-0.6
3,256,966	+		Pf6N2E2_2768	0.76	+0.3
3,256,966	+		Pf6N2E2_2768	0.76	+0.3
3,256,967	-		Pf6N2E2_2768	0.76	+0.1
3,256,999	+		Pf6N2E2_2768	0.79	-0.8
3,256,999	+		Pf6N2E2_2768	0.79	-0.7
3,257,000	-		Pf6N2E2_2768	0.79	+0.3
3,257,029	+		Pf6N2E2_2768	0.82	+0.3
3,257,029	+		Pf6N2E2_2768	0.82	-0.7
3,257,030	-		Pf6N2E2_2768	0.82	+0.3
3,257,143	+				-0.7
3,257,143	+				+0.3
3,257,143	+				-0.7
3,257,143	+				+0.3
3,257,143	+				-0.7
3,257,144	-				-0.7
3,257,144	-				+0.6
3,257,144	-				-0.7
3,257,144	-				+0.3
3,257,144	-				-1.1
3,257,144	-				-0.3
3,257,144	-				-0.1
3,257,144	-				-0.7
3,257,144	-				-0.8
3,257,144	-				+0.3
3,257,144	-				+1.3
3,257,144	-				+0.3
3,257,144	-				-1.3
3,257,144	-				-0.3
3,257,144	-				-1.5
3,257,144	-				+0.0
3,257,167	+				+0.3
3,257,167	+				+0.3
3,257,167	+				-0.7
3,257,167	+				-0.7
3,257,168	-				-0.7
3,257,168	-				+0.3
3,257,256	+				-0.7
3,257,256	+				+0.3
3,257,256	+				+0.3
3,257,256	+				+0.3
3,257,257	-				-0.7
3,257,279	-				+0.3
3,257,354	+		Pf6N2E2_2769	0.20	-0.7
3,257,420	+		Pf6N2E2_2769	0.34	+0.3
3,257,420	+		Pf6N2E2_2769	0.34	+0.3
3,257,420	+		Pf6N2E2_2769	0.34	-1.4
3,257,420	+		Pf6N2E2_2769	0.34	+0.3
3,257,420	+		Pf6N2E2_2769	0.34	-1.7
3,257,421	-		Pf6N2E2_2769	0.35	+0.3
3,257,421	-		Pf6N2E2_2769	0.35	-1.3
3,257,453	-		Pf6N2E2_2769	0.42	-0.7
3,257,501	-		Pf6N2E2_2769	0.52	-0.7
3,257,598	-		Pf6N2E2_2769	0.73	+0.3
3,257,654	+		Pf6N2E2_2769	0.85	-0.7
3,257,654	+		Pf6N2E2_2769	0.85	+0.3
3,257,655	-		Pf6N2E2_2769	0.85	+0.3
3,257,724	-				-0.7
3,257,739	+				+0.3
3,257,739	+				-1.8
3,257,739	+				+0.3
3,257,775	+				-1.0
3,257,775	+				-0.3
3,257,775	+				+0.3
3,257,931	+		Pf6N2E2_2770	0.14	+0.3
3,257,931	+		Pf6N2E2_2770	0.14	+0.3
3,257,932	-		Pf6N2E2_2770	0.14	-1.0
3,257,947	-		Pf6N2E2_2770	0.15	-0.7
3,257,957	+		Pf6N2E2_2770	0.15	+0.3
3,257,957	+		Pf6N2E2_2770	0.15	-0.7
3,257,957	+		Pf6N2E2_2770	0.15	-0.7
3,257,957	+		Pf6N2E2_2770	0.15	-0.7
3,257,957	+		Pf6N2E2_2770	0.15	-1.7
3,257,958	-		Pf6N2E2_2770	0.15	+0.3
3,257,958	-		Pf6N2E2_2770	0.15	+0.3
3,257,958	-		Pf6N2E2_2770	0.15	-0.7
3,257,958	-		Pf6N2E2_2770	0.15	-0.7
3,257,958	-		Pf6N2E2_2770	0.15	-1.3
3,258,168	+		Pf6N2E2_2770	0.29	+0.3
3,258,169	-		Pf6N2E2_2770	0.29	-0.7
3,258,564	+		Pf6N2E2_2770	0.55	+0.3
3,258,564	+		Pf6N2E2_2770	0.55	-1.7
3,258,564	+		Pf6N2E2_2770	0.55	-0.7
3,258,564	+		Pf6N2E2_2770	0.55	-0.7
3,258,564	+		Pf6N2E2_2770	0.55	+0.3
3,258,565	-		Pf6N2E2_2770	0.56	+0.3
3,258,565	-		Pf6N2E2_2770	0.56	+0.3
3,258,565	-		Pf6N2E2_2770	0.56	+0.3
3,258,565	-		Pf6N2E2_2770	0.56	+0.3
3,258,565	-		Pf6N2E2_2770	0.56	-1.7
3,258,565	-		Pf6N2E2_2770	0.56	-0.1
3,258,565	-		Pf6N2E2_2770	0.56	+0.3
3,258,565	-		Pf6N2E2_2770	0.56	-0.3
3,258,565	-		Pf6N2E2_2770	0.56	+0.3
3,258,565	-		Pf6N2E2_2770	0.56	-1.2
3,258,566	+		Pf6N2E2_2770	0.56	+0.3
3,258,567	-		Pf6N2E2_2770	0.56	+0.3
3,258,567	-		Pf6N2E2_2770	0.56	+0.3
3,258,567	-		Pf6N2E2_2770	0.56	-0.7