Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2599

Experiment: Ying_OrganicAcid7 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 3
3,056,013	-		Pf6N2E2_2597	0.66	+0.3
3,056,139	+		Pf6N2E2_2597	0.74	-0.7
3,056,139	+		Pf6N2E2_2597	0.74	+0.3
3,056,139	+		Pf6N2E2_2597	0.74	-1.2
3,056,140	-		Pf6N2E2_2597	0.74	+0.3
3,056,140	-		Pf6N2E2_2597	0.74	+0.3
3,056,140	-		Pf6N2E2_2597	0.74	-0.7
3,056,140	-		Pf6N2E2_2597	0.74	+1.3
3,056,191	-		Pf6N2E2_2597	0.78	+1.7
3,056,312	+		Pf6N2E2_2597	0.86	-0.7
3,056,343	-		Pf6N2E2_2597	0.88	+1.9
3,056,343	-		Pf6N2E2_2597	0.88	+1.7
3,056,343	-		Pf6N2E2_2597	0.88	+1.9
3,056,526	+				+1.7
3,056,526	+				+2.7
3,056,526	+				+0.3
3,056,527	-				+0.3
3,056,561	-				+0.3
3,056,573	-				+0.3
3,056,573	-				+0.3
3,056,573	-				+0.3
3,056,573	-				+1.7
3,056,573	-				+0.3
3,056,617	-				-1.3
3,056,625	-				+0.3
3,056,625	-				-0.7
3,056,627	+				+1.1
3,056,627	+				+1.8
3,056,627	+				+0.3
3,056,627	+				+0.3
3,056,628	-				+0.3
3,056,628	-				+0.6
3,056,628	-				+0.3
3,056,631	+				-0.7
3,056,632	-				+0.9
3,056,632	-				+1.1
3,056,632	-				+0.3
3,056,682	-				-0.7
3,056,708	-				-1.3
3,057,001	-				-0.9
3,057,001	-				+0.3
3,057,126	+		Pf6N2E2_2599	0.32	+0.3
3,057,126	+		Pf6N2E2_2599	0.32	+0.3
3,057,126	+		Pf6N2E2_2599	0.32	-0.7
3,057,126	+		Pf6N2E2_2599	0.32	-0.7
3,057,126	+		Pf6N2E2_2599	0.32	+0.3
3,057,126	+		Pf6N2E2_2599	0.32	-0.7
3,057,127	-		Pf6N2E2_2599	0.32	+0.3
3,057,127	-		Pf6N2E2_2599	0.32	-0.7
3,057,127	-		Pf6N2E2_2599	0.32	-0.3
3,057,127	-		Pf6N2E2_2599	0.32	+0.3
3,057,127	-		Pf6N2E2_2599	0.32	-1.3
3,057,133	-		Pf6N2E2_2599	0.34	-2.1
3,057,133	-		Pf6N2E2_2599	0.34	-1.1
3,057,133	-		Pf6N2E2_2599	0.34	-0.7
3,057,133	-		Pf6N2E2_2599	0.34	-1.7
3,057,227	+		Pf6N2E2_2599	0.58	+0.3
3,057,244	+		Pf6N2E2_2599	0.62	-0.5
3,057,247	-		Pf6N2E2_2599	0.63	-0.7
3,057,381	-				-1.0
3,057,399	+				-0.7
3,057,399	+				+0.3
3,057,399	+				-1.4
3,057,399	+				-0.6
3,057,399	+				-0.7
3,057,400	-				-0.9
3,057,400	-				-0.3
3,057,424	+				-0.8
3,057,424	+				-0.9
3,057,424	+				-0.2
3,057,424	+				+0.3
3,057,425	-				+0.3
3,057,427	-				-1.3
3,057,435	+				+0.0
3,057,459	+				-0.7
3,057,460	-				-1.3
3,058,111	-		Pf6N2E2_2600	0.41	-1.0
3,058,111	-		Pf6N2E2_2600	0.41	+0.3
3,058,111	-		Pf6N2E2_2600	0.41	+0.3
3,058,111	-		Pf6N2E2_2600	0.41	-1.7
3,058,111	-		Pf6N2E2_2600	0.41	+0.3
3,058,111	-		Pf6N2E2_2600	0.41	-1.2
3,058,111	-		Pf6N2E2_2600	0.41	+0.3
3,058,111	-		Pf6N2E2_2600	0.41	-0.7
3,058,111	-		Pf6N2E2_2600	0.41	-0.7
3,058,111	-		Pf6N2E2_2600	0.41	+0.3
3,058,112	+		Pf6N2E2_2600	0.41	+0.3
3,058,112	+		Pf6N2E2_2600	0.41	-0.8
3,058,112	+		Pf6N2E2_2600	0.41	+0.3
3,058,112	+		Pf6N2E2_2600	0.41	-0.9
3,058,112	+		Pf6N2E2_2600	0.41	+1.6
3,058,112	+		Pf6N2E2_2600	0.41	+0.3
3,058,113	-		Pf6N2E2_2600	0.41	+0.3
3,058,113	-		Pf6N2E2_2600	0.41	+0.3
3,058,113	-		Pf6N2E2_2600	0.41	+0.3
3,058,113	-		Pf6N2E2_2600	0.41	+0.3
3,058,113	-		Pf6N2E2_2600	0.41	+0.3
3,058,113	-		Pf6N2E2_2600	0.41	-1.2
3,058,224	+		Pf6N2E2_2600	0.49	+0.3
3,058,224	+		Pf6N2E2_2600	0.49	+0.3
3,058,224	+		Pf6N2E2_2600	0.49	+0.3
3,058,225	-		Pf6N2E2_2600	0.49	+0.3
3,058,225	-		Pf6N2E2_2600	0.49	-0.8
3,058,225	-		Pf6N2E2_2600	0.49	+0.3
3,058,225	-		Pf6N2E2_2600	0.49	+0.3
3,058,225	-		Pf6N2E2_2600	0.49	-0.7
3,058,225	-		Pf6N2E2_2600	0.49	+0.3
3,058,225	-		Pf6N2E2_2600	0.49	-1.3
3,058,225	-		Pf6N2E2_2600	0.49	-0.8
3,058,323	+		Pf6N2E2_2600	0.56	-3.4
3,058,324	-		Pf6N2E2_2600	0.56	+0.3
3,058,383	+		Pf6N2E2_2600	0.60	+0.3
3,058,384	-		Pf6N2E2_2600	0.60	-0.7
3,058,384	-		Pf6N2E2_2600	0.60	+0.3
3,058,384	-		Pf6N2E2_2600	0.60	-1.2