Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_66

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
105,092	+				+0.5
105,251	+				-0.7
105,252	-				-6.0
105,252	-				-6.0
105,283	+				+0.2
105,329	+		Pf6N2E2_65	0.14	-1.0
105,330	-		Pf6N2E2_65	0.14	+0.2
105,330	-		Pf6N2E2_65	0.14	-2.4
105,330	-		Pf6N2E2_65	0.14	-4.9
105,330	-		Pf6N2E2_65	0.14	-0.8
105,330	-		Pf6N2E2_65	0.14	-0.8
105,436	+		Pf6N2E2_65	0.28	-0.8
105,436	+		Pf6N2E2_65	0.28	-0.4
105,437	-		Pf6N2E2_65	0.28	-1.4
105,697	+		Pf6N2E2_65	0.62	+0.2
105,698	-		Pf6N2E2_65	0.62	+0.2
105,698	-		Pf6N2E2_65	0.62	+0.2
105,801	+		Pf6N2E2_65	0.76	+0.2
105,802	-		Pf6N2E2_65	0.76	-0.8
105,802	-		Pf6N2E2_65	0.76	+0.2
105,829	+		Pf6N2E2_65	0.79	+0.2
105,829	+		Pf6N2E2_65	0.79	-0.4
105,855	+		Pf6N2E2_65	0.83	-1.6
105,954	+				+0.2
105,955	-				+0.2
106,013	-				+0.2
106,013	-				+0.2
106,147	+				-0.8
106,147	+				-3.7
106,148	-				+0.2
106,148	-				+0.2
106,470	+		Pf6N2E2_66	0.38	+0.2
106,470	+		Pf6N2E2_66	0.38	+0.2
106,475	-		Pf6N2E2_66	0.39	-0.8
106,475	-		Pf6N2E2_66	0.39	-3.1
106,475	-		Pf6N2E2_66	0.39	+0.2
106,529	-		Pf6N2E2_66	0.44	+0.2
106,529	-		Pf6N2E2_66	0.44	+0.2
106,543	+		Pf6N2E2_66	0.45	-4.4
106,637	+		Pf6N2E2_66	0.54	+0.2
106,717	+		Pf6N2E2_66	0.61	-0.8
106,717	+		Pf6N2E2_66	0.61	-1.8
106,717	+		Pf6N2E2_66	0.61	+0.2
106,717	+		Pf6N2E2_66	0.61	+0.2
106,717	+		Pf6N2E2_66	0.61	+0.2
106,717	+		Pf6N2E2_66	0.61	+0.2
106,718	-		Pf6N2E2_66	0.61	+0.2
106,718	-		Pf6N2E2_66	0.61	-7.3
106,718	-		Pf6N2E2_66	0.61	+0.2
106,718	-		Pf6N2E2_66	0.61	+0.2
106,718	-		Pf6N2E2_66	0.61	-6.2
106,718	-		Pf6N2E2_66	0.61	+0.2
106,718	-		Pf6N2E2_66	0.61	+0.2
106,882	+		Pf6N2E2_66	0.76	+0.2
106,882	+		Pf6N2E2_66	0.76	-5.0
106,883	-		Pf6N2E2_66	0.77	-2.9
106,883	-		Pf6N2E2_66	0.77	+0.2
106,883	-		Pf6N2E2_66	0.77	-0.8
106,883	-		Pf6N2E2_66	0.77	+0.2
106,883	-		Pf6N2E2_66	0.77	-2.8
106,975	+		Pf6N2E2_66	0.85	-3.2
107,076	+				-1.4
107,111	+				-0.6
107,177	+				+0.2