Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5894

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
6,713,727	+				-0.7
6,713,727	+				+0.3
6,713,727	+				+0.3
6,713,727	+				+0.3
6,713,728	-				-0.7
6,713,728	-				-0.7
6,713,729	+				+0.3
6,713,900	+				+0.3
6,713,900	+				+0.3
6,714,140	+				-0.1
6,714,140	+				-1.3
6,714,394	+				+0.3
6,714,465	+				+0.3
6,714,469	-				-0.7
6,714,560	+				+0.3
6,714,645	+				+0.3
6,714,645	+				-3.9
6,714,669	+				+0.3
6,714,669	+				+0.3
6,714,669	+				+0.3
6,714,669	+				-0.7
6,714,670	-				+0.3
6,714,839	+		Pf6N2E2_5894	0.24	+0.3
6,714,839	+		Pf6N2E2_5894	0.24	-0.7
6,714,839	+		Pf6N2E2_5894	0.24	+0.3
6,714,840	-		Pf6N2E2_5894	0.24	-0.7
6,714,840	-		Pf6N2E2_5894	0.24	-2.5
6,714,858	+		Pf6N2E2_5894	0.28	-0.7
6,714,858	+		Pf6N2E2_5894	0.28	+0.3
6,714,858	+		Pf6N2E2_5894	0.28	-0.7
6,714,858	+		Pf6N2E2_5894	0.28	+0.3
6,714,858	+		Pf6N2E2_5894	0.28	+0.3
6,714,858	+		Pf6N2E2_5894	0.28	+0.3
6,714,918	-		Pf6N2E2_5894	0.40	-1.3
6,714,979	-		Pf6N2E2_5894	0.52	+0.3
6,715,134	+		Pf6N2E2_5894	0.82	-2.3
6,715,134	+		Pf6N2E2_5894	0.82	+0.3
6,715,134	+		Pf6N2E2_5894	0.82	-2.0
6,715,134	+		Pf6N2E2_5894	0.82	-3.8
6,715,148	+		Pf6N2E2_5894	0.85	+0.3
6,715,149	-		Pf6N2E2_5894	0.85	+0.3
6,715,149	-		Pf6N2E2_5894	0.85	-1.7
6,715,149	-		Pf6N2E2_5894	0.85	-0.7
6,715,184	+				+0.3
6,715,184	+				-3.7
6,715,185	-				-1.7
6,715,235	+				-0.0
6,715,235	+				-2.4
6,715,236	-				-1.3
6,715,256	+				-0.9
6,715,295	-				-2.2
6,715,295	-				-0.7
6,715,295	-				-0.7
6,715,315	+				-0.7
6,715,315	+				-0.7
6,715,315	+				-0.3
6,715,316	-				+0.3
6,715,429	-		Pf6N2E2_5895	0.11	-0.7
6,715,429	-		Pf6N2E2_5895	0.11	-1.7
6,715,429	-		Pf6N2E2_5895	0.11	+0.3
6,715,429	-		Pf6N2E2_5895	0.11	-0.1
6,715,429	-		Pf6N2E2_5895	0.11	-0.7
6,715,429	-		Pf6N2E2_5895	0.11	+0.3
6,715,602	-		Pf6N2E2_5895	0.25	-3.1
6,715,607	+		Pf6N2E2_5895	0.25	+0.3
6,715,607	+		Pf6N2E2_5895	0.25	+0.3
6,715,607	+		Pf6N2E2_5895	0.25	+0.3
6,715,607	+		Pf6N2E2_5895	0.25	-0.7
6,715,607	+		Pf6N2E2_5895	0.25	+0.3
6,715,607	+		Pf6N2E2_5895	0.25	+0.3
6,715,608	-		Pf6N2E2_5895	0.25	+0.3
6,715,608	-		Pf6N2E2_5895	0.25	-0.7
6,715,608	-		Pf6N2E2_5895	0.25	-0.7
6,715,609	+		Pf6N2E2_5895	0.25	-0.7
6,715,609	+		Pf6N2E2_5895	0.25	-1.7
6,715,609	+		Pf6N2E2_5895	0.25	-1.7
6,715,609	+		Pf6N2E2_5895	0.25	+0.3
6,715,610	-		Pf6N2E2_5895	0.25	+0.3
6,715,610	-		Pf6N2E2_5895	0.25	-0.6
6,715,648	+		Pf6N2E2_5895	0.28	+0.3
6,715,780	+		Pf6N2E2_5895	0.39	+0.3
6,715,780	+		Pf6N2E2_5895	0.39	+0.3
6,715,780	+		Pf6N2E2_5895	0.39	+0.3
6,715,780	+		Pf6N2E2_5895	0.39	+0.3
6,715,780	+		Pf6N2E2_5895	0.39	+0.3
6,715,882	+		Pf6N2E2_5895	0.47	-0.7
6,715,883	-		Pf6N2E2_5895	0.47	+0.3
6,715,891	+		Pf6N2E2_5895	0.48	-1.3
6,715,892	-		Pf6N2E2_5895	0.48	+0.3
6,715,892	-		Pf6N2E2_5895	0.48	+0.3
6,715,892	-		Pf6N2E2_5895	0.48	-1.7
6,715,985	+		Pf6N2E2_5895	0.55	-0.7
6,715,985	+		Pf6N2E2_5895	0.55	-1.3
6,715,986	-		Pf6N2E2_5895	0.55	+0.3
6,715,994	+		Pf6N2E2_5895	0.56	+0.3
6,716,163	+		Pf6N2E2_5895	0.69	+0.3
6,716,164	-		Pf6N2E2_5895	0.69	+0.3
6,716,169	+		Pf6N2E2_5895	0.70	-0.1
6,716,169	+		Pf6N2E2_5895	0.70	-0.7
6,716,169	+		Pf6N2E2_5895	0.70	+0.3
6,716,169	+		Pf6N2E2_5895	0.70	+0.3
6,716,169	+		Pf6N2E2_5895	0.70	+0.3
6,716,169	+		Pf6N2E2_5895	0.70	+0.3
6,716,170	-		Pf6N2E2_5895	0.70	-2.1
6,716,170	-		Pf6N2E2_5895	0.70	-0.7
6,716,170	-		Pf6N2E2_5895	0.70	+0.3