Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5707

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
6,522,469	+		Pf6N2E2_5706	0.57	+0.3
6,522,590	+		Pf6N2E2_5706	0.69	-0.6
6,522,591	-		Pf6N2E2_5706	0.69	+0.3
6,522,591	-		Pf6N2E2_5706	0.69	-0.7
6,522,676	-		Pf6N2E2_5706	0.78	-1.3
6,522,701	+		Pf6N2E2_5706	0.80	+0.3
6,522,701	+		Pf6N2E2_5706	0.80	+0.3
6,522,702	-		Pf6N2E2_5706	0.80	+0.3
6,522,824	+				+0.3
6,522,825	-				+0.3
6,522,825	-				-0.7
6,522,825	-				-1.3
6,522,930	-				-0.7
6,522,981	+				-0.7
6,522,981	+				+0.3
6,522,981	+				-0.7
6,523,068	+				-1.7
6,523,068	+				+0.3
6,523,103	+				+2.1
6,523,264	+				-1.5
6,523,475	-		Pf6N2E2_5707	0.18	+0.3
6,523,475	-		Pf6N2E2_5707	0.18	-1.3
6,523,475	-		Pf6N2E2_5707	0.18	-2.2
6,523,545	-		Pf6N2E2_5707	0.23	-1.1
6,523,562	+		Pf6N2E2_5707	0.24	-0.7
6,523,562	+		Pf6N2E2_5707	0.24	-0.7
6,523,562	+		Pf6N2E2_5707	0.24	+0.3
6,523,562	+		Pf6N2E2_5707	0.24	-0.7
6,523,562	+		Pf6N2E2_5707	0.24	-2.0
6,523,744	+		Pf6N2E2_5707	0.38	-2.1
6,523,867	+		Pf6N2E2_5707	0.47	+0.3
6,523,868	-		Pf6N2E2_5707	0.47	+0.3
6,523,915	+		Pf6N2E2_5707	0.51	-1.3
6,523,915	+		Pf6N2E2_5707	0.51	-0.7
6,523,915	+		Pf6N2E2_5707	0.51	-0.7
6,523,915	+		Pf6N2E2_5707	0.51	+0.3
6,523,915	+		Pf6N2E2_5707	0.51	+0.3
6,523,915	+		Pf6N2E2_5707	0.51	-1.8
6,523,915	+		Pf6N2E2_5707	0.51	-0.9
6,523,915	+		Pf6N2E2_5707	0.51	-2.3
6,523,915	+		Pf6N2E2_5707	0.51	+0.3
6,523,915	+		Pf6N2E2_5707	0.51	-0.7
6,523,915	+		Pf6N2E2_5707	0.51	+0.3
6,523,915	+		Pf6N2E2_5707	0.51	-2.5
6,523,915	+		Pf6N2E2_5707	0.51	-0.7
6,523,915	+		Pf6N2E2_5707	0.51	-1.8
6,523,915	+		Pf6N2E2_5707	0.51	-2.3
6,523,916	-		Pf6N2E2_5707	0.51	+0.3
6,523,916	-		Pf6N2E2_5707	0.51	+0.3
6,523,916	-		Pf6N2E2_5707	0.51	-1.0
6,523,916	-		Pf6N2E2_5707	0.51	-1.7
6,523,916	-		Pf6N2E2_5707	0.51	+0.3
6,523,916	-		Pf6N2E2_5707	0.51	-0.7
6,523,916	-		Pf6N2E2_5707	0.51	-0.7
6,523,916	-		Pf6N2E2_5707	0.51	-1.9
6,523,916	-		Pf6N2E2_5707	0.51	-0.7
6,523,916	-		Pf6N2E2_5707	0.51	+0.3
6,523,917	+		Pf6N2E2_5707	0.51	-0.7
6,523,918	-		Pf6N2E2_5707	0.51	+0.3
6,523,944	-		Pf6N2E2_5707	0.53	+0.3
6,523,944	-		Pf6N2E2_5707	0.53	-1.5
6,523,946	+		Pf6N2E2_5707	0.53	-1.7
6,523,946	+		Pf6N2E2_5707	0.53	-2.0
6,524,105	+		Pf6N2E2_5707	0.65	-2.0
6,524,105	+		Pf6N2E2_5707	0.65	-0.7
6,524,105	+		Pf6N2E2_5707	0.65	-2.2
6,524,148	+		Pf6N2E2_5707	0.68	+0.3
6,524,158	+		Pf6N2E2_5707	0.69	+0.3
6,524,158	+		Pf6N2E2_5707	0.69	-0.7
6,524,158	+		Pf6N2E2_5707	0.69	+0.3
6,524,159	-		Pf6N2E2_5707	0.69	+0.3
6,524,581	+				+0.3
6,524,582	-				-1.3
6,524,595	+				+0.3
6,524,595	+				-1.2
6,524,625	-				-0.7
6,524,699	-				-1.7
6,524,705	+				+0.3
6,524,705	+				-1.2
6,524,705	+				+0.3
6,524,705	+				-1.3
6,524,706	-				-1.2
6,524,706	-				-2.5
6,524,706	-				+0.3
6,524,706	-				+0.3
6,524,706	-				-1.7
6,524,706	-				-0.7
6,524,706	-				+0.3
6,524,856	+				-0.0
6,524,857	-				+0.3
6,525,152	+		Pf6N2E2_5708	0.22	+0.3
6,525,152	+		Pf6N2E2_5708	0.22	+0.3
6,525,152	+		Pf6N2E2_5708	0.22	-0.7
6,525,153	-		Pf6N2E2_5708	0.22	-0.4
6,525,153	-		Pf6N2E2_5708	0.22	-1.3
6,525,153	-		Pf6N2E2_5708	0.22	-2.0
6,525,209	+		Pf6N2E2_5708	0.27	-0.7
6,525,245	+		Pf6N2E2_5708	0.30	+0.3
6,525,245	+		Pf6N2E2_5708	0.30	-0.6
6,525,245	+		Pf6N2E2_5708	0.30	+0.3
6,525,245	+		Pf6N2E2_5708	0.30	+0.3
6,525,245	+		Pf6N2E2_5708	0.30	+0.3
6,525,246	-		Pf6N2E2_5708	0.30	+0.3
6,525,311	+		Pf6N2E2_5708	0.36	-1.7
6,525,311	+		Pf6N2E2_5708	0.36	-0.8
6,525,312	-		Pf6N2E2_5708	0.36	-0.3
6,525,312	-		Pf6N2E2_5708	0.36	-0.2