Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5668

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
6,479,894	+		Pf6N2E2_5667	0.16	-0.7
6,479,978	+		Pf6N2E2_5667	0.25	-0.7
6,479,978	+		Pf6N2E2_5667	0.25	-1.3
6,479,979	-		Pf6N2E2_5667	0.25	-0.7
6,479,979	-		Pf6N2E2_5667	0.25	+0.3
6,479,979	-		Pf6N2E2_5667	0.25	-3.0
6,480,029	+		Pf6N2E2_5667	0.30	-0.7
6,480,296	+		Pf6N2E2_5667	0.56	-1.7
6,480,297	-		Pf6N2E2_5667	0.56	+0.3
6,480,356	+		Pf6N2E2_5667	0.61	+0.3
6,480,357	-		Pf6N2E2_5667	0.62	-0.7
6,480,357	-		Pf6N2E2_5667	0.62	-2.3
6,480,357	-		Pf6N2E2_5667	0.62	+0.3
6,480,357	-		Pf6N2E2_5667	0.62	-1.3
6,480,357	-		Pf6N2E2_5667	0.62	-1.3
6,480,357	-		Pf6N2E2_5667	0.62	-0.7
6,480,455	+		Pf6N2E2_5667	0.71	-1.3
6,480,464	+		Pf6N2E2_5667	0.72	-0.7
6,480,465	-		Pf6N2E2_5667	0.72	-1.7
6,480,602	-		Pf6N2E2_5667	0.85	+0.3
6,480,763	+				+0.3
6,480,763	+				-2.5
6,481,087	+		Pf6N2E2_5668	0.23	-0.7
6,481,183	+		Pf6N2E2_5668	0.29	+0.3
6,481,332	-		Pf6N2E2_5668	0.40	+0.3
6,481,332	-		Pf6N2E2_5668	0.40	+0.3
6,481,540	+		Pf6N2E2_5668	0.54	-3.5
6,481,540	+		Pf6N2E2_5668	0.54	-2.3
6,481,549	-		Pf6N2E2_5668	0.54	-3.6
6,481,910	-		Pf6N2E2_5668	0.79	+0.3
6,481,947	+		Pf6N2E2_5668	0.82	-1.0
6,481,948	-		Pf6N2E2_5668	0.82	-2.3
6,481,948	-		Pf6N2E2_5668	0.82	-2.3
6,481,954	+		Pf6N2E2_5668	0.82	+0.3
6,481,955	-		Pf6N2E2_5668	0.82	+0.3
6,482,119	+				+0.3
6,482,123	-				+0.3
6,482,123	-				-1.3
6,482,134	+				-3.0
6,482,305	+				+0.3
6,482,306	-				-3.6
6,482,316	+				-1.2
6,482,317	-				-3.4
6,482,317	-				+0.3
6,482,318	+				+0.1
6,482,358	-				+0.3
6,482,380	-				-2.4
6,482,380	-				-0.7
6,482,395	+				-2.7
6,482,395	+				+0.3
6,482,396	-				+0.3
6,482,396	-				-1.8
6,482,399	+				+0.3
6,482,399	+				+0.3
6,482,400	-				+0.3
6,482,400	-				+0.3
6,482,400	-				+0.3
6,482,400	-				+0.3
6,482,753	+		Pf6N2E2_5669	0.30	+0.3
6,482,754	-		Pf6N2E2_5669	0.30	+0.3
6,482,754	-		Pf6N2E2_5669	0.30	-2.3
6,482,754	-		Pf6N2E2_5669	0.30	+0.3
6,482,754	-		Pf6N2E2_5669	0.30	-2.5
6,482,754	-		Pf6N2E2_5669	0.30	+0.3
6,482,754	-		Pf6N2E2_5669	0.30	+0.3
6,482,978	+		Pf6N2E2_5669	0.47	-4.8
6,482,979	-		Pf6N2E2_5669	0.47	+0.3
6,483,053	+		Pf6N2E2_5669	0.52	-1.3
6,483,054	-		Pf6N2E2_5669	0.52	-0.7
6,483,137	+		Pf6N2E2_5669	0.59	-1.3
6,483,138	-		Pf6N2E2_5669	0.59	+0.3
6,483,138	-		Pf6N2E2_5669	0.59	+0.3
6,483,138	-		Pf6N2E2_5669	0.59	-0.7
6,483,138	-		Pf6N2E2_5669	0.59	+0.3