Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5464

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
6,275,924	+		Pf6N2E2_5463	0.53	-0.3
6,275,924	+		Pf6N2E2_5463	0.53	-0.7
6,275,985	+		Pf6N2E2_5463	0.56	-1.7
6,275,985	+		Pf6N2E2_5463	0.56	-1.4
6,275,985	+		Pf6N2E2_5463	0.56	-0.7
6,275,985	+		Pf6N2E2_5463	0.56	-0.7
6,275,986	-		Pf6N2E2_5463	0.56	-1.3
6,275,986	-		Pf6N2E2_5463	0.56	-0.7
6,275,986	-		Pf6N2E2_5463	0.56	-2.7
6,275,995	+		Pf6N2E2_5463	0.57	+0.3
6,275,996	-		Pf6N2E2_5463	0.57	+0.3
6,276,003	+		Pf6N2E2_5463	0.57	-1.3
6,276,003	+		Pf6N2E2_5463	0.57	+0.3
6,276,003	+		Pf6N2E2_5463	0.57	-1.3
6,276,003	+		Pf6N2E2_5463	0.57	-1.7
6,276,003	+		Pf6N2E2_5463	0.57	+0.3
6,276,046	+		Pf6N2E2_5463	0.60	+0.3
6,276,046	+		Pf6N2E2_5463	0.60	-0.7
6,276,046	+		Pf6N2E2_5463	0.60	-1.4
6,276,047	-		Pf6N2E2_5463	0.60	+0.3
6,276,047	-		Pf6N2E2_5463	0.60	-2.0
6,276,285	+		Pf6N2E2_5463	0.73	+0.3
6,276,285	+		Pf6N2E2_5463	0.73	+0.3
6,276,285	+		Pf6N2E2_5463	0.73	+0.3
6,276,286	-		Pf6N2E2_5463	0.73	-0.7
6,276,286	-		Pf6N2E2_5463	0.73	-0.7
6,276,459	+		Pf6N2E2_5463	0.82	-1.7
6,276,460	-		Pf6N2E2_5463	0.82	+0.3
6,276,460	-		Pf6N2E2_5463	0.82	-0.7
6,276,576	+		Pf6N2E2_5463	0.89	-1.1
6,276,672	+				-1.5
6,276,673	-				-0.9
6,276,673	-				+0.3
6,276,705	+				+0.3
6,276,705	+				+0.3
6,276,705	+				-1.7
6,276,705	+				-0.7
6,276,705	+				+0.3
6,276,706	-				-0.7
6,276,706	-				-0.4
6,276,776	-				+0.3
6,276,835	-				-1.4
6,276,866	+				-1.3
6,276,866	+				-1.7
6,276,866	+				-0.7
6,276,867	-				-0.5
6,276,867	-				-1.1
6,277,046	+		Pf6N2E2_5464	0.29	-1.7
6,277,046	+		Pf6N2E2_5464	0.29	-1.3
6,277,046	+		Pf6N2E2_5464	0.29	-0.7
6,277,047	-		Pf6N2E2_5464	0.29	-2.4
6,277,047	-		Pf6N2E2_5464	0.29	+0.3
6,277,121	+		Pf6N2E2_5464	0.36	-2.0
6,277,121	+		Pf6N2E2_5464	0.36	+0.3
6,277,122	-		Pf6N2E2_5464	0.36	-2.0
6,277,122	-		Pf6N2E2_5464	0.36	+0.3
6,277,187	+		Pf6N2E2_5464	0.43	+0.3
6,277,187	+		Pf6N2E2_5464	0.43	+0.3
6,277,229	+		Pf6N2E2_5464	0.48	-0.7
6,277,459	-		Pf6N2E2_5464	0.72	+0.3
6,277,723	+				+0.3
6,277,723	+				+0.3
6,277,723	+				+0.3
6,277,724	-				+0.3
6,277,724	-				+0.3
6,277,761	-				-0.7
6,277,853	+				+0.3
6,277,853	+				-0.7
6,277,853	+				-1.7
6,277,853	+				+0.3
6,277,853	+				-0.7
6,277,853	+				+0.3
6,277,853	+				+0.3
6,277,854	-				+0.3
6,277,854	-				-0.7
6,277,854	-				+0.3
6,277,854	-				+0.3
6,277,856	+				-0.7
6,277,857	-				-0.7
6,277,857	-				-0.9
6,277,857	-				-0.2
6,278,060	+		Pf6N2E2_5465	0.15	-1.7
6,278,060	+		Pf6N2E2_5465	0.15	+0.3
6,278,060	+		Pf6N2E2_5465	0.15	-1.5
6,278,060	+		Pf6N2E2_5465	0.15	-0.5
6,278,061	-		Pf6N2E2_5465	0.15	-0.7
6,278,114	-		Pf6N2E2_5465	0.18	-1.3
6,278,167	+		Pf6N2E2_5465	0.21	-1.3
6,278,167	+		Pf6N2E2_5465	0.21	+0.1
6,278,236	-		Pf6N2E2_5465	0.25	-0.7
6,278,291	+		Pf6N2E2_5465	0.28	+0.3
6,278,291	+		Pf6N2E2_5465	0.28	-0.5
6,278,292	-		Pf6N2E2_5465	0.28	+0.3
6,278,501	+		Pf6N2E2_5465	0.39	+0.3