Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5457

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
6,263,121	+		Pf6N2E2_5456	0.24	-1.4
6,263,141	+		Pf6N2E2_5456	0.26	+0.3
6,263,141	+		Pf6N2E2_5456	0.26	-0.3
6,263,141	+		Pf6N2E2_5456	0.26	-1.1
6,263,141	+		Pf6N2E2_5456	0.26	+0.3
6,263,141	+		Pf6N2E2_5456	0.26	+0.1
6,263,142	-		Pf6N2E2_5456	0.26	+0.3
6,263,142	-		Pf6N2E2_5456	0.26	-0.3
6,263,142	-		Pf6N2E2_5456	0.26	-1.0
6,263,142	-		Pf6N2E2_5456	0.26	-0.7
6,263,180	+		Pf6N2E2_5456	0.30	-0.7
6,263,180	+		Pf6N2E2_5456	0.30	+0.3
6,263,181	-		Pf6N2E2_5456	0.30	-0.7
6,263,181	-		Pf6N2E2_5456	0.30	-1.0
6,263,181	-		Pf6N2E2_5456	0.30	-0.7
6,263,181	-		Pf6N2E2_5456	0.30	-0.3
6,263,181	-		Pf6N2E2_5456	0.30	-0.5
6,263,195	+		Pf6N2E2_5456	0.31	-0.7
6,263,233	+		Pf6N2E2_5456	0.35	-0.7
6,263,234	-		Pf6N2E2_5456	0.35	-0.5
6,263,237	-		Pf6N2E2_5456	0.35	-0.7
6,263,237	-		Pf6N2E2_5456	0.35	-0.5
6,263,237	-		Pf6N2E2_5456	0.35	-1.7
6,263,249	+		Pf6N2E2_5456	0.36	-0.7
6,263,250	-		Pf6N2E2_5456	0.36	-0.8
6,263,266	+		Pf6N2E2_5456	0.38	-1.7
6,263,267	-		Pf6N2E2_5456	0.38	-1.8
6,263,270	+		Pf6N2E2_5456	0.38	+0.3
6,263,271	-		Pf6N2E2_5456	0.38	-1.3
6,263,271	-		Pf6N2E2_5456	0.38	+0.3
6,263,271	-		Pf6N2E2_5456	0.38	+0.3
6,263,277	-		Pf6N2E2_5456	0.39	+0.3
6,263,320	+		Pf6N2E2_5456	0.43	+0.3
6,263,320	+		Pf6N2E2_5456	0.43	+0.3
6,263,320	+		Pf6N2E2_5456	0.43	-0.7
6,263,320	+		Pf6N2E2_5456	0.43	+0.3
6,263,320	+		Pf6N2E2_5456	0.43	+0.3
6,263,320	+		Pf6N2E2_5456	0.43	+0.6
6,263,321	-		Pf6N2E2_5456	0.43	+0.3
6,263,321	-		Pf6N2E2_5456	0.43	+0.3
6,263,321	-		Pf6N2E2_5456	0.43	+0.3
6,263,337	-		Pf6N2E2_5456	0.45	+0.3
6,263,355	-		Pf6N2E2_5456	0.46	+0.3
6,263,355	-		Pf6N2E2_5456	0.46	+0.3
6,263,355	-		Pf6N2E2_5456	0.46	+0.3
6,263,355	-		Pf6N2E2_5456	0.46	-0.7
6,263,355	-		Pf6N2E2_5456	0.46	+0.3
6,263,356	+		Pf6N2E2_5456	0.46	+0.3
6,263,357	-		Pf6N2E2_5456	0.47	+0.3
6,263,482	+		Pf6N2E2_5456	0.58	+0.3
6,263,482	+		Pf6N2E2_5456	0.58	+0.3
6,263,793	-		Pf6N2E2_5456	0.88	+0.3
6,263,793	-		Pf6N2E2_5456	0.88	+0.3
6,263,793	-		Pf6N2E2_5456	0.88	+0.3
6,263,793	-		Pf6N2E2_5456	0.88	+0.3
6,263,793	-		Pf6N2E2_5456	0.88	+0.3
6,263,793	-		Pf6N2E2_5456	0.88	+0.3
6,263,876	+				+0.3
6,263,876	+				+0.3
6,263,876	+				-0.7
6,263,877	-				-1.3
6,263,877	-				-0.5
6,263,915	+				+0.3
6,263,915	+				-0.7
6,263,915	+				-1.0
6,263,916	-				+0.3
6,263,920	+				+0.3
6,263,921	-				+0.3
6,263,921	-				-0.7
6,263,959	-				-1.0
6,264,059	+				+1.3
6,264,059	+				-0.1
6,264,116	+				-0.7
6,264,116	+				-0.7
6,264,117	-				-1.3
6,264,152	+				-0.7
6,264,172	+				+0.3
6,264,172	+				-0.7
6,264,172	+				+0.3
6,264,173	-				-2.6
6,264,173	-				-2.3
6,264,173	-				-0.7
6,264,298	+				-1.7
6,264,298	+				-3.3
6,264,298	+				-1.7
6,264,299	-				+0.3
6,264,563	-		Pf6N2E2_5457	0.14	-0.7
6,264,563	-		Pf6N2E2_5457	0.14	-0.7
6,264,749	+		Pf6N2E2_5457	0.20	+0.3
6,264,833	-		Pf6N2E2_5457	0.23	-2.0
6,264,894	-		Pf6N2E2_5457	0.25	-1.8
6,264,905	-		Pf6N2E2_5457	0.25	-2.7
6,264,918	+		Pf6N2E2_5457	0.26	-2.4
6,264,918	+		Pf6N2E2_5457	0.26	+0.3
6,264,918	+		Pf6N2E2_5457	0.26	+0.3
6,264,967	+		Pf6N2E2_5457	0.27	+0.3
6,264,967	+		Pf6N2E2_5457	0.27	+0.3
6,264,968	-		Pf6N2E2_5457	0.27	-2.8
6,264,968	-		Pf6N2E2_5457	0.27	-0.7
6,264,992	-		Pf6N2E2_5457	0.28	-1.7
6,265,099	+		Pf6N2E2_5457	0.31	-0.7
6,265,100	-		Pf6N2E2_5457	0.32	-2.0
6,265,100	-		Pf6N2E2_5457	0.32	-0.7
6,265,186	+		Pf6N2E2_5457	0.34	+0.3
6,265,186	+		Pf6N2E2_5457	0.34	+0.3
6,265,187	-		Pf6N2E2_5457	0.34	-2.3
6,265,246	+		Pf6N2E2_5457	0.36	+0.3
6,265,247	-		Pf6N2E2_5457	0.36	-0.7
6,265,247	-		Pf6N2E2_5457	0.36	-1.3
6,265,247	-		Pf6N2E2_5457	0.36	+0.3
6,265,295	+		Pf6N2E2_5457	0.38	+0.3
6,265,296	-		Pf6N2E2_5457	0.38	-0.7
6,265,309	+		Pf6N2E2_5457	0.38	+0.3
6,265,309	+		Pf6N2E2_5457	0.38	-1.3
6,265,309	+		Pf6N2E2_5457	0.38	-0.7
6,265,309	+		Pf6N2E2_5457	0.38	-2.8
6,265,310	-		Pf6N2E2_5457	0.38	-0.3
6,265,310	-		Pf6N2E2_5457	0.38	-2.0
6,265,310	-		Pf6N2E2_5457	0.38	+0.3
6,265,310	-		Pf6N2E2_5457	0.38	-0.7
6,265,310	-		Pf6N2E2_5457	0.38	+0.3
6,265,318	+		Pf6N2E2_5457	0.39	-0.7
6,265,477	+		Pf6N2E2_5457	0.44	-0.7
6,265,477	+		Pf6N2E2_5457	0.44	-0.7
6,265,478	-		Pf6N2E2_5457	0.44	+0.3
6,265,478	-		Pf6N2E2_5457	0.44	-0.7
6,265,540	+		Pf6N2E2_5457	0.46	-0.7
6,265,540	+		Pf6N2E2_5457	0.46	+0.3
6,265,618	+		Pf6N2E2_5457	0.48	+0.3
6,265,651	+		Pf6N2E2_5457	0.49	-3.1
6,265,651	+		Pf6N2E2_5457	0.49	+0.3
6,265,652	-		Pf6N2E2_5457	0.49	-1.3
6,265,652	-		Pf6N2E2_5457	0.49	-0.7
6,265,730	+		Pf6N2E2_5457	0.52	+0.3
6,265,885	+		Pf6N2E2_5457	0.57	+0.3
6,265,886	-		Pf6N2E2_5457	0.57	+0.3
6,265,958	-		Pf6N2E2_5457	0.59	-2.6
6,265,958	-		Pf6N2E2_5457	0.59	+0.3
6,266,175	+		Pf6N2E2_5457	0.66	-2.6
6,266,175	+		Pf6N2E2_5457	0.66	-2.1
6,266,176	-		Pf6N2E2_5457	0.66	+0.3
6,266,176	-		Pf6N2E2_5457	0.66	+0.3
6,266,179	+		Pf6N2E2_5457	0.66	+0.3
6,266,179	+		Pf6N2E2_5457	0.66	-1.7
6,266,179	+		Pf6N2E2_5457	0.66	+0.3
6,266,179	+		Pf6N2E2_5457	0.66	-0.7
6,266,179	+		Pf6N2E2_5457	0.66	-0.7
6,266,180	-		Pf6N2E2_5457	0.66	-2.5
6,266,180	-		Pf6N2E2_5457	0.66	-2.9
6,266,180	-		Pf6N2E2_5457	0.66	+0.3
6,266,312	-		Pf6N2E2_5457	0.71	-1.3
6,266,389	+		Pf6N2E2_5457	0.73	-0.7
6,266,389	+		Pf6N2E2_5457	0.73	+0.3
6,266,389	+		Pf6N2E2_5457	0.73	+0.3
6,266,390	-		Pf6N2E2_5457	0.73	-2.3
6,266,390	-		Pf6N2E2_5457	0.73	-2.6
6,266,441	-		Pf6N2E2_5457	0.75	-2.5
6,266,449	-		Pf6N2E2_5457	0.75	-3.0
6,266,519	-		Pf6N2E2_5457	0.77	-1.3
6,266,744	-		Pf6N2E2_5457	0.84	-1.3
6,266,812	+		Pf6N2E2_5457	0.87	-0.7
6,266,839	+		Pf6N2E2_5457	0.87	+0.3
6,266,839	+		Pf6N2E2_5457	0.87	-0.7
6,266,840	-		Pf6N2E2_5457	0.88	+0.3
6,266,840	-		Pf6N2E2_5457	0.88	-1.3
6,266,840	-		Pf6N2E2_5457	0.88	-1.5
6,266,884	+		Pf6N2E2_5457	0.89	-2.4
6,266,884	+		Pf6N2E2_5457	0.89	-0.7
6,266,884	+		Pf6N2E2_5457	0.89	+0.3
6,266,885	-		Pf6N2E2_5457	0.89	-1.3
6,266,885	-		Pf6N2E2_5457	0.89	-0.7
6,266,885	-		Pf6N2E2_5457	0.89	+0.3
6,266,930	-				-2.3
6,266,965	+				+0.3
6,266,965	+				-2.1
6,266,966	-				+0.3
6,267,001	+				-1.8
6,267,001	+				-2.2
6,267,001	+				+0.3
6,267,002	-				+0.3
6,267,002	-				-0.7
6,267,002	-				+0.3
6,267,019	+				-0.7
6,267,019	+				-0.7
6,267,019	+				-0.7
6,267,019	+				-1.3
6,267,020	-				-0.7
6,267,156	+				-1.3
6,267,156	+				+0.3
6,267,173	+				+0.3
6,267,228	-				+0.7
6,267,274	+				-1.7
6,267,274	+				-0.7
6,267,275	-				-0.7
6,267,554	+				-1.3
6,267,555	-				+0.3
6,267,579	-		Pf6N2E2_5458	0.11	+0.3
6,267,579	-		Pf6N2E2_5458	0.11	+0.3
6,267,579	-		Pf6N2E2_5458	0.11	+0.3
6,267,579	-		Pf6N2E2_5458	0.11	-2.5
6,267,579	-		Pf6N2E2_5458	0.11	+0.3
6,267,579	-		Pf6N2E2_5458	0.11	-0.9
6,267,579	-		Pf6N2E2_5458	0.11	-0.6
6,267,602	+		Pf6N2E2_5458	0.17	-1.3
6,267,619	+		Pf6N2E2_5458	0.22	+0.3
6,267,619	+		Pf6N2E2_5458	0.22	-0.7
6,267,620	-		Pf6N2E2_5458	0.22	-0.7
6,267,620	-		Pf6N2E2_5458	0.22	+0.3
6,267,719	+		Pf6N2E2_5458	0.49	+0.3
6,267,719	+		Pf6N2E2_5458	0.49	+0.3
6,267,720	-		Pf6N2E2_5458	0.49	-1.3
6,267,720	-		Pf6N2E2_5458	0.49	+0.3
6,267,720	-		Pf6N2E2_5458	0.49	+0.3
6,267,870	+				-1.7
6,267,899	+				+0.3
6,267,934	+				+0.3
6,267,934	+				-0.7
6,268,033	+				-0.3
6,268,033	+				-1.3
6,268,034	-				+0.3
6,268,034	-				+0.3
6,268,034	-				+0.3
6,268,034	-				+0.3
6,268,034	-				-0.6
6,268,034	-				-0.7
6,268,034	-				-1.3
6,268,097	+				-0.7
6,268,097	+				-1.3
6,268,097	+				+0.3
6,268,097	+				+0.3
6,268,097	+				-3.0
6,268,097	+				-0.6
6,268,097	+				+0.3
6,268,097	+				-1.7
6,268,097	+				+0.3
6,268,097	+				+0.3
6,268,097	+				+0.3
6,268,097	+				-0.7
6,268,097	+				-2.0
6,268,097	+				+0.3
6,268,097	+				-0.7
6,268,098	-				+0.0
6,268,098	-				+0.3
6,268,098	-				+0.3
6,268,098	-				+0.3
6,268,098	-				+0.3
6,268,098	-				-0.7
6,268,098	-				+0.3
6,268,100	+				-0.7
6,268,101	-				-0.7