Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5405

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
6,209,916	+		Pf6N2E2_5404	0.11	-0.7
6,209,916	+		Pf6N2E2_5404	0.11	+0.3
6,209,916	+		Pf6N2E2_5404	0.11	-1.6
6,209,917	-		Pf6N2E2_5404	0.11	+0.3
6,209,917	-		Pf6N2E2_5404	0.11	+0.3
6,209,925	+		Pf6N2E2_5404	0.12	-0.2
6,209,925	+		Pf6N2E2_5404	0.12	+0.3
6,209,926	-		Pf6N2E2_5404	0.12	-2.3
6,209,926	-		Pf6N2E2_5404	0.12	-1.2
6,210,054	+		Pf6N2E2_5404	0.24	-1.9
6,210,054	+		Pf6N2E2_5404	0.24	-1.6
6,210,054	+		Pf6N2E2_5404	0.24	-1.9
6,210,055	-		Pf6N2E2_5404	0.24	-2.2
6,210,055	-		Pf6N2E2_5404	0.24	-1.7
6,210,060	+		Pf6N2E2_5404	0.24	-2.2
6,210,064	-		Pf6N2E2_5404	0.25	-0.8
6,210,162	+		Pf6N2E2_5404	0.34	-0.7
6,210,162	+		Pf6N2E2_5404	0.34	-0.7
6,210,162	+		Pf6N2E2_5404	0.34	-2.0
6,210,163	-		Pf6N2E2_5404	0.34	+0.3
6,210,522	+		Pf6N2E2_5404	0.66	+0.3
6,210,523	-		Pf6N2E2_5404	0.66	+0.3
6,210,538	+		Pf6N2E2_5404	0.68	-1.2
6,210,539	-		Pf6N2E2_5404	0.68	-2.7
6,210,539	-		Pf6N2E2_5404	0.68	+0.3
6,210,539	-		Pf6N2E2_5404	0.68	+0.3
6,210,573	+		Pf6N2E2_5404	0.71	-0.7
6,210,696	-		Pf6N2E2_5404	0.82	+0.3
6,210,792	+				+0.3
6,210,792	+				-0.7
6,210,792	+				-0.7
6,210,793	-				+0.3
6,210,833	+				-1.7
6,210,833	+				+0.3
6,210,889	-				-1.7
6,210,896	+				-0.7
6,210,896	+				+0.3
6,210,896	+				+0.3
6,210,896	+				-1.7
6,210,896	+				+0.3
6,210,896	+				+0.3
6,210,896	+				-2.0
6,210,896	+				-0.7
6,210,896	+				-2.0
6,210,897	-				+0.3
6,210,897	-				-1.2
6,210,897	-				-0.7
6,210,902	-				-0.7
6,210,943	+				-0.7
6,210,943	+				-2.6
6,210,964	+				-2.0
6,210,965	-				-0.7
6,210,965	-				-0.7
6,210,972	-				+0.3
6,211,027	+		Pf6N2E2_5405	0.16	+0.3
6,211,028	-		Pf6N2E2_5405	0.16	+0.3
6,211,298	+		Pf6N2E2_5405	0.52	+0.3
6,211,298	+		Pf6N2E2_5405	0.52	-3.1
6,211,298	+		Pf6N2E2_5405	0.52	-1.2
6,211,464	+		Pf6N2E2_5405	0.73	+0.3
6,211,464	+		Pf6N2E2_5405	0.73	-1.8
6,211,464	+		Pf6N2E2_5405	0.73	-1.8
6,211,464	+		Pf6N2E2_5405	0.73	+0.3
6,211,465	-		Pf6N2E2_5405	0.74	-0.7
6,211,465	-		Pf6N2E2_5405	0.74	+0.3
6,211,877	-		Pf6N2E2_5406	0.31	+0.3
6,211,934	-		Pf6N2E2_5406	0.43	+0.3
6,211,934	-		Pf6N2E2_5406	0.43	+0.3
6,211,952	-		Pf6N2E2_5406	0.47	+0.3
6,211,952	-		Pf6N2E2_5406	0.47	+0.3
6,212,272	+		Pf6N2E2_5407	0.21	+0.3
6,212,273	-		Pf6N2E2_5407	0.22	+1.3
6,212,273	-		Pf6N2E2_5407	0.22	-1.1
6,212,302	+		Pf6N2E2_5407	0.31	+0.3
6,212,303	-		Pf6N2E2_5407	0.31	-1.7
6,212,303	-		Pf6N2E2_5407	0.31	+0.3
6,212,303	-		Pf6N2E2_5407	0.31	+0.7
6,212,303	-		Pf6N2E2_5407	0.31	-0.8
6,212,332	+		Pf6N2E2_5407	0.41	+0.3
6,212,333	-		Pf6N2E2_5407	0.41	-0.7
6,212,333	-		Pf6N2E2_5407	0.41	-1.3
6,212,333	-		Pf6N2E2_5407	0.41	+0.3
6,212,333	-		Pf6N2E2_5407	0.41	-0.7
6,212,333	-		Pf6N2E2_5407	0.41	-2.5
6,212,333	-		Pf6N2E2_5407	0.41	-0.7
6,212,333	-		Pf6N2E2_5407	0.41	-1.2
6,212,351	-		Pf6N2E2_5407	0.47	-0.4
6,212,351	-		Pf6N2E2_5407	0.47	+0.3
6,212,351	-		Pf6N2E2_5407	0.47	-0.9
6,212,566	+				-2.5
6,212,604	-				+0.3
6,212,620	-				+0.3
6,212,655	+				-1.4
6,212,656	-				-1.7
6,212,656	-				+0.7
6,212,656	-				-0.7