Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5337

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
6,131,906	+				-0.7
6,131,908	+				-1.3
6,131,908	+				+0.3
6,131,908	+				-1.3
6,131,909	-				-3.3
6,131,909	-				+0.7
6,131,911	+				-0.7
6,131,911	+				-0.7
6,131,911	+				-0.7
6,131,912	-				-1.9
6,131,939	+				-0.7
6,131,939	+				-0.7
6,131,943	+				+0.3
6,131,943	+				+0.3
6,131,943	+				-1.3
6,131,944	-				-1.7
6,131,944	-				-2.0
6,131,944	-				+0.3
6,131,991	+				+0.3
6,131,992	-				-2.6
6,132,005	+				-0.3
6,132,009	+				-2.2
6,132,009	+				-1.9
6,132,010	-				-2.4
6,132,010	-				-3.3
6,132,012	+				-1.9
6,132,013	-				-2.9
6,132,013	-				-3.2
6,132,025	+				-1.8
6,132,025	+				-1.7
6,132,025	+				+0.3
6,132,370	+		Pf6N2E2_5337	0.53	-2.6
6,132,370	+				-2.1
6,132,370	+		Pf6N2E2_5337	0.53	-2.6
6,132,370	+		Pf6N2E2_5337	0.53	-2.5
6,132,370	+		Pf6N2E2_5337	0.53	-2.6
6,132,371	-		Pf6N2E2_5337	0.53	-2.9
6,132,371	-		Pf6N2E2_5337	0.53	-3.2
6,132,429	+		Pf6N2E2_5337	0.62	-2.1
6,132,430	-		Pf6N2E2_5337	0.63	-2.9
6,132,505	+		Pf6N2E2_5337	0.75	-2.1
6,132,506	-		Pf6N2E2_5337	0.75	-2.8
6,132,553	+		Pf6N2E2_5337	0.83	-3.2
6,132,553	+		Pf6N2E2_5337	0.83	-2.4
6,132,553	+		Pf6N2E2_5337	0.83	-1.8
6,132,554	-				-2.8
6,132,601	+				-2.1
6,132,602	-				-2.7
6,132,602	-				-2.9
6,132,723	+				-3.0
6,132,724	-				-2.9
6,132,727	-				-3.1
6,132,727	-				-3.6
6,132,753	+				-2.7
6,132,753	+				-2.5
6,132,825	+		Pf6N2E2_5338	0.14	-2.1
6,132,825	+		Pf6N2E2_5338	0.14	-1.9
6,132,825	+		Pf6N2E2_5338	0.14	-2.5
6,132,825	+		Pf6N2E2_5338	0.14	-2.7
6,132,825	+		Pf6N2E2_5338	0.14	-2.6
6,132,826	-		Pf6N2E2_5338	0.14	-3.3
6,132,826	-		Pf6N2E2_5338	0.14	+0.3
6,132,864	+		Pf6N2E2_5338	0.18	-2.5
6,132,864	+		Pf6N2E2_5338	0.18	-1.6
6,132,864	+		Pf6N2E2_5338	0.18	-2.8
6,132,864	+		Pf6N2E2_5338	0.18	-2.6
6,132,864	+		Pf6N2E2_5338	0.18	-2.4
6,132,865	-		Pf6N2E2_5338	0.18	-2.9
6,132,865	-		Pf6N2E2_5338	0.18	-3.0
6,132,972	+		Pf6N2E2_5338	0.26	-2.5
6,132,981	+		Pf6N2E2_5338	0.27	-2.8
6,132,981	+		Pf6N2E2_5338	0.27	-2.5
6,132,982	-		Pf6N2E2_5338	0.27	-2.8
6,133,060	-		Pf6N2E2_5338	0.34	-3.2
6,133,170	+		Pf6N2E2_5338	0.43	-2.5
6,133,171	-		Pf6N2E2_5338	0.43	-3.1
6,133,171	-		Pf6N2E2_5338	0.43	-3.7
6,133,365	+		Pf6N2E2_5338	0.59	-2.8
6,133,365	+		Pf6N2E2_5338	0.59	-3.4
6,133,365	+		Pf6N2E2_5338	0.59	-2.7
6,133,366	-		Pf6N2E2_5338	0.59	-3.4
6,133,368	+		Pf6N2E2_5338	0.59	-2.6
6,133,368	+		Pf6N2E2_5338	0.59	-2.7
6,133,382	+		Pf6N2E2_5338	0.60	-2.6
6,133,452	+		Pf6N2E2_5338	0.66	-3.0
6,133,452	+		Pf6N2E2_5338	0.66	-2.8
6,133,452	+		Pf6N2E2_5338	0.66	-2.6
6,133,453	-		Pf6N2E2_5338	0.66	-2.9
6,133,453	-		Pf6N2E2_5338	0.66	-3.5
6,133,453	-		Pf6N2E2_5338	0.66	-3.0
6,133,453	-		Pf6N2E2_5338	0.66	-3.8
6,133,453	-		Pf6N2E2_5338	0.66	-3.1
6,133,453	-		Pf6N2E2_5338	0.66	-3.8
6,133,524	+		Pf6N2E2_5338	0.72	-4.1
6,133,524	+		Pf6N2E2_5338	0.72	-3.0
6,133,540	-		Pf6N2E2_5338	0.73	-3.6