Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5257

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
6,050,177	+				+0.4
6,050,178	-				-0.6
6,050,371	+		Pf6N2E2_5256	0.26	+0.4
6,050,371	+		Pf6N2E2_5256	0.26	-1.5
6,050,372	-		Pf6N2E2_5256	0.27	+0.4
6,050,445	+		Pf6N2E2_5256	0.36	+0.4
6,050,445	+		Pf6N2E2_5256	0.36	-0.7
6,050,446	-		Pf6N2E2_5256	0.36	-0.2
6,050,716	+		Pf6N2E2_5256	0.72	+0.4
6,050,716	+		Pf6N2E2_5256	0.72	-1.2
6,050,716	+		Pf6N2E2_5256	0.72	-1.6
6,050,716	+		Pf6N2E2_5256	0.72	-0.6
6,050,717	-		Pf6N2E2_5256	0.72	-0.6
6,050,752	+		Pf6N2E2_5256	0.77	-0.4
6,050,753	-		Pf6N2E2_5256	0.77	+0.4
6,050,846	-		Pf6N2E2_5256	0.89	-2.2
6,050,869	+				-1.2
6,051,051	-				+0.4
6,051,072	-				+0.4
6,051,087	+				-1.2
6,051,088	-				-3.6
6,051,088	-				+0.4
6,051,105	+				-0.6
6,051,105	+				-2.3
6,051,105	+				+0.4
6,051,105	+				-0.6
6,051,106	-				-3.3
6,051,143	+				+0.4
6,051,144	-				-3.6
6,051,144	-				-0.6
6,051,161	+				+0.4
6,051,262	+		Pf6N2E2_5257	0.10	-1.6
6,051,262	+		Pf6N2E2_5257	0.10	-3.7
6,051,262	+		Pf6N2E2_5257	0.10	-2.5
6,051,262	+		Pf6N2E2_5257	0.10	-2.8
6,051,263	-		Pf6N2E2_5257	0.11	-0.6
6,051,263	-		Pf6N2E2_5257	0.11	+0.4
6,051,379	+		Pf6N2E2_5257	0.23	+0.4
6,051,379	+		Pf6N2E2_5257	0.23	+0.4
6,051,379	+		Pf6N2E2_5257	0.23	+0.4
6,051,380	-		Pf6N2E2_5257	0.23	-2.6
6,051,380	-		Pf6N2E2_5257	0.23	+0.4
6,051,538	+		Pf6N2E2_5257	0.41	-2.0
6,051,538	+		Pf6N2E2_5257	0.41	+0.4
6,051,538	+		Pf6N2E2_5257	0.41	-0.6
6,051,538	+		Pf6N2E2_5257	0.41	+0.4
6,051,538	+		Pf6N2E2_5257	0.41	-2.8
6,051,538	+		Pf6N2E2_5257	0.41	+0.4
6,051,538	+		Pf6N2E2_5257	0.41	-0.6
6,051,538	+		Pf6N2E2_5257	0.41	-2.6
6,051,539	-		Pf6N2E2_5257	0.41	+0.4
6,051,539	-		Pf6N2E2_5257	0.41	-2.5
6,051,607	+		Pf6N2E2_5257	0.48	-0.6
6,051,608	-		Pf6N2E2_5257	0.48	-1.2
6,051,673	+		Pf6N2E2_5257	0.55	+0.4
6,051,673	+		Pf6N2E2_5257	0.55	-1.2
6,051,673	+		Pf6N2E2_5257	0.55	-0.6
6,051,751	+		Pf6N2E2_5257	0.64	+0.4
6,051,751	+		Pf6N2E2_5257	0.64	-7.6
6,051,752	-		Pf6N2E2_5257	0.64	-7.9
6,051,752	-		Pf6N2E2_5257	0.64	+0.4
6,051,752	-		Pf6N2E2_5257	0.64	-3.0
6,051,757	+		Pf6N2E2_5257	0.64	-0.6
6,051,758	-		Pf6N2E2_5257	0.64	+0.4
6,051,758	-		Pf6N2E2_5257	0.64	+0.4
6,051,758	-		Pf6N2E2_5257	0.64	+0.4
6,051,788	-		Pf6N2E2_5257	0.68	-4.6
6,052,075	+				-7.1
6,052,076	-				+0.4
6,052,076	-				-7.1
6,052,081	+				-0.6
6,052,135	+				+0.4
6,052,155	+				+0.4
6,052,185	+				+0.4
6,052,246	+				-6.6
6,052,246	+				-0.6
6,052,246	+				-7.1
6,052,246	+				-0.6
6,052,246	+				+0.4
6,052,246	+				-2.2
6,052,246	+				+0.4
6,052,247	-				-2.6
6,052,385	-		Pf6N2E2_5258	0.15	-2.5
6,052,441	+		Pf6N2E2_5258	0.18	+0.4
6,052,441	+		Pf6N2E2_5258	0.18	-0.6
6,052,441	+		Pf6N2E2_5258	0.18	-2.2
6,052,442	-		Pf6N2E2_5258	0.18	-3.7
6,052,442	-		Pf6N2E2_5258	0.18	-4.0
6,052,642	+		Pf6N2E2_5258	0.29	+0.4
6,052,642	+		Pf6N2E2_5258	0.29	+0.4
6,052,810	-		Pf6N2E2_5258	0.38	+0.4
6,052,810	-		Pf6N2E2_5258	0.38	-1.2
6,052,840	+		Pf6N2E2_5258	0.39	-3.0
6,052,841	-		Pf6N2E2_5258	0.39	-0.6