Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5243

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
6,039,777	-		Pf6N2E2_5242	0.59	+0.4
6,039,950	+		Pf6N2E2_5242	0.71	-4.6
6,039,951	-		Pf6N2E2_5242	0.71	-3.0
6,039,951	-		Pf6N2E2_5242	0.71	+0.4
6,040,101	-		Pf6N2E2_5242	0.81	-3.1
6,040,101	-		Pf6N2E2_5242	0.81	+0.4
6,040,361	-				-1.6
6,040,428	-		Pf6N2E2_5243	0.26	-1.1
6,040,469	-		Pf6N2E2_5243	0.48	-2.3
6,040,564	+				-1.6
6,040,590	-				+0.4
6,040,694	+				-1.2
6,040,850	-				+0.4
6,040,850	-				-0.6
6,040,850	-				+0.4
6,040,892	-				-0.9
6,041,006	-				-0.5
6,041,051	+				+0.4
6,041,051	+				+0.4
6,041,051	+				-0.6
6,041,052	-				+0.4
6,041,052	-				-1.6
6,041,052	-				-1.2
6,041,053	+				+0.4
6,041,054	-				+0.4
6,041,054	-				-0.6
6,041,101	+				+0.4
6,041,346	+				+0.4
6,041,346	+				-0.6
6,041,346	+				+0.4
6,041,346	+				-0.6
6,041,405	+				-0.6
6,041,420	+				-0.6
6,041,420	+				-0.6
6,041,420	+				-0.3
6,041,420	+				-0.5
6,041,420	+				-1.8
6,041,421	-				+0.4
6,041,421	-				+0.4
6,041,421	-				+0.4
6,041,421	-				-0.3
6,041,481	+				+0.4
6,041,498	+				-0.6
6,041,498	+				+0.4
6,041,498	+				+0.4
6,041,499	-				-1.2
6,041,523	-				+0.4