Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5055

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
5,828,902	+		Pf6N2E2_5054	0.31	+0.3
5,828,903	-		Pf6N2E2_5054	0.31	-0.7
5,828,903	-		Pf6N2E2_5054	0.31	+0.3
5,829,018	-		Pf6N2E2_5054	0.44	-0.5
5,829,086	+		Pf6N2E2_5054	0.51	-1.5
5,829,086	+		Pf6N2E2_5054	0.51	-0.7
5,829,087	-		Pf6N2E2_5054	0.51	-0.7
5,829,110	+		Pf6N2E2_5054	0.54	-0.7
5,829,110	+		Pf6N2E2_5054	0.54	-0.7
5,829,110	+		Pf6N2E2_5054	0.54	-0.7
5,829,111	-		Pf6N2E2_5054	0.54	+0.3
5,829,111	-		Pf6N2E2_5054	0.54	-0.5
5,829,111	-		Pf6N2E2_5054	0.54	+0.3
5,829,111	-		Pf6N2E2_5054	0.54	-0.7
5,829,512	-				+0.3
5,829,577	+				-2.0
5,829,578	-				-0.7
5,829,676	-				+0.3
5,829,702	-				-0.7
5,829,719	-				+0.3
5,829,743	+				-0.7
5,829,743	+				+0.3
5,829,744	-				-0.9
5,829,744	-				-0.3
5,829,744	-				-0.7
5,829,744	-				+0.3
5,829,744	-				-1.2
5,829,826	-				+0.3
5,829,866	+		Pf6N2E2_5055	0.11	-0.5
5,829,866	+		Pf6N2E2_5055	0.11	-0.7
5,829,874	+		Pf6N2E2_5055	0.12	+0.3
5,829,875	-		Pf6N2E2_5055	0.12	+0.3
5,829,875	-		Pf6N2E2_5055	0.12	+0.3
5,829,875	-		Pf6N2E2_5055	0.12	+0.9
5,829,875	-		Pf6N2E2_5055	0.12	+0.3
5,829,875	-		Pf6N2E2_5055	0.12	+0.3
5,829,875	-		Pf6N2E2_5055	0.12	-0.7
5,829,919	+		Pf6N2E2_5055	0.17	-1.2
5,829,919	+		Pf6N2E2_5055	0.17	+0.3
5,829,919	+		Pf6N2E2_5055	0.17	-1.7
5,829,919	+		Pf6N2E2_5055	0.17	-1.2
5,829,919	+		Pf6N2E2_5055	0.17	+0.3
5,829,919	+		Pf6N2E2_5055	0.17	+0.3
5,829,920	-		Pf6N2E2_5055	0.17	+0.3
5,829,920	-		Pf6N2E2_5055	0.17	-0.7
5,829,980	+		Pf6N2E2_5055	0.24	+0.1
5,829,981	-		Pf6N2E2_5055	0.24	-0.7
5,829,981	-		Pf6N2E2_5055	0.24	+0.3
5,829,984	+		Pf6N2E2_5055	0.24	-0.7
5,829,985	-		Pf6N2E2_5055	0.25	+0.3
5,829,985	-		Pf6N2E2_5055	0.25	+0.3
5,829,985	-		Pf6N2E2_5055	0.25	-1.2
5,830,189	-		Pf6N2E2_5055	0.48	+0.3
5,830,279	+		Pf6N2E2_5055	0.58	+0.3
5,830,279	+		Pf6N2E2_5055	0.58	+0.3
5,830,279	+		Pf6N2E2_5055	0.58	+0.3
5,830,279	+		Pf6N2E2_5055	0.58	+0.3
5,830,280	-		Pf6N2E2_5055	0.58	-1.2
5,830,280	-		Pf6N2E2_5055	0.58	-1.7
5,830,280	-		Pf6N2E2_5055	0.58	-0.5
5,830,280	-		Pf6N2E2_5055	0.58	+0.3
5,830,280	-		Pf6N2E2_5055	0.58	+0.3
5,830,282	-		Pf6N2E2_5055	0.58	-0.5
5,830,855	+				-0.3
5,830,855	+				-0.4
5,830,855	+				-0.7
5,830,855	+				-1.2
5,830,856	-				+0.1
5,830,856	-				+0.3
5,830,856	-				-0.7
5,830,856	-				-1.5
5,830,879	+				-0.7
5,830,879	+				-0.6
5,830,879	+				+0.3
5,830,880	-				-0.7
5,830,880	-				-0.5
5,830,912	+				-0.5
5,830,912	+				-0.3
5,830,912	+				-0.7
5,830,913	-				+0.2
5,830,913	-				+0.3
5,830,913	-				+0.3
5,830,913	-				+0.3
5,830,913	-				-0.6
5,830,913	-				+0.3
5,830,916	+				+0.3
5,830,916	+				+0.3
5,830,916	+				+0.3
5,830,916	+				-2.0
5,830,916	+				-0.7
5,830,917	-				+0.3
5,831,029	+		Pf6N2E2_5056	0.16	+0.3
5,831,029	+		Pf6N2E2_5056	0.16	-0.1
5,831,030	-		Pf6N2E2_5056	0.16	+0.3
5,831,030	-		Pf6N2E2_5056	0.16	+0.3
5,831,030	-		Pf6N2E2_5056	0.16	+0.3
5,831,266	+		Pf6N2E2_5056	0.34	-0.7
5,831,317	+		Pf6N2E2_5056	0.38	+0.3
5,831,317	+		Pf6N2E2_5056	0.38	+0.7
5,831,317	+		Pf6N2E2_5056	0.38	-1.2
5,831,318	-		Pf6N2E2_5056	0.38	+0.3
5,831,318	-		Pf6N2E2_5056	0.38	-1.2
5,831,318	-		Pf6N2E2_5056	0.38	+0.3
5,831,347	+		Pf6N2E2_5056	0.40	-0.7
5,831,348	-		Pf6N2E2_5056	0.40	+0.3
5,831,348	-		Pf6N2E2_5056	0.40	-0.7
5,831,348	-		Pf6N2E2_5056	0.40	-0.2
5,831,353	+		Pf6N2E2_5056	0.40	-0.7
5,831,353	+		Pf6N2E2_5056	0.40	-1.2
5,831,353	+		Pf6N2E2_5056	0.40	+0.3
5,831,353	+		Pf6N2E2_5056	0.40	-1.7
5,831,354	-		Pf6N2E2_5056	0.40	-0.2
5,831,354	-		Pf6N2E2_5056	0.40	+1.9
5,831,354	-		Pf6N2E2_5056	0.40	+0.3
5,831,354	-		Pf6N2E2_5056	0.40	-0.6
5,831,354	-		Pf6N2E2_5056	0.40	-0.7
5,831,354	-		Pf6N2E2_5056	0.40	-1.8
5,831,473	+		Pf6N2E2_5056	0.49	+0.3
5,831,473	+		Pf6N2E2_5056	0.49	-1.2
5,831,473	+		Pf6N2E2_5056	0.49	-0.7
5,831,474	-		Pf6N2E2_5056	0.49	+0.3
5,831,474	-		Pf6N2E2_5056	0.49	+1.3
5,831,521	+		Pf6N2E2_5056	0.53	-1.2
5,831,522	-		Pf6N2E2_5056	0.53	-0.7