Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4918

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
5,671,814	+		Pf6N2E2_4916	0.30	+0.4
5,671,815	-		Pf6N2E2_4916	0.30	-0.6
5,672,021	-		Pf6N2E2_4916	0.61	+0.4
5,672,060	+		Pf6N2E2_4916	0.67	+0.4
5,672,061	-		Pf6N2E2_4916	0.67	-1.2
5,672,102	+		Pf6N2E2_4916	0.74	-0.6
5,672,478	+		Pf6N2E2_4917	0.42	-0.6
5,672,478	+		Pf6N2E2_4917	0.42	+0.4
5,672,478	+		Pf6N2E2_4917	0.42	-1.1
5,672,479	-		Pf6N2E2_4917	0.42	-1.2
5,672,479	-		Pf6N2E2_4917	0.42	+0.0
5,672,596	-		Pf6N2E2_4917	0.66	+0.4
5,672,596	-		Pf6N2E2_4917	0.66	+0.4
5,672,775	-				-0.6
5,672,786	+				-1.2
5,672,786	+				-0.6
5,672,786	+				+0.4
5,672,787	-				+0.4
5,672,787	-				-2.0
5,672,787	-				-2.0
5,672,787	-				-0.2
5,672,788	+				-1.0
5,672,793	+				+0.4
5,672,794	-				-0.8
5,672,800	+				+0.4
5,672,800	+				-1.0
5,672,800	+				+0.4
5,672,801	-				-1.2
5,672,801	-				-1.2
5,672,801	-				+0.4
5,673,232	+		Pf6N2E2_4918	0.83	+0.4
5,673,232	+		Pf6N2E2_4918	0.83	-1.6
5,673,253	+		Pf6N2E2_4918	0.87	-1.2
5,673,363	+				+1.4
5,673,363	+				+0.4
5,673,363	+				+0.4
5,673,363	+				-0.6
5,673,363	+				+0.4