Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4693

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
5,425,099	+				+0.4
5,425,099	+				-0.6
5,425,100	-				-0.6
5,425,100	-				-1.4
5,425,100	-				-0.6
5,425,100	-				-2.1
5,425,226	+		Pf6N2E2_4692	0.13	+0.4
5,425,226	+		Pf6N2E2_4692	0.13	+0.4
5,425,226	+		Pf6N2E2_4692	0.13	-1.1
5,425,227	-		Pf6N2E2_4692	0.13	+0.4
5,425,227	-		Pf6N2E2_4692	0.13	+0.4
5,425,572	+		Pf6N2E2_4692	0.52	-0.6
5,425,572	+		Pf6N2E2_4692	0.52	+0.4
5,425,572	+		Pf6N2E2_4692	0.52	+0.4
5,425,572	+		Pf6N2E2_4692	0.52	-0.7
5,425,572	+		Pf6N2E2_4692	0.52	+0.4
5,425,572	+		Pf6N2E2_4692	0.52	-0.6
5,425,572	+		Pf6N2E2_4692	0.52	+0.4
5,425,572	+		Pf6N2E2_4692	0.52	-0.6
5,425,572	+		Pf6N2E2_4692	0.52	-1.6
5,425,573	-		Pf6N2E2_4692	0.52	-0.1
5,425,573	-		Pf6N2E2_4692	0.52	-0.5
5,425,573	-		Pf6N2E2_4692	0.52	-1.8
5,425,573	-		Pf6N2E2_4692	0.52	+0.4
5,425,573	-		Pf6N2E2_4692	0.52	-0.6
5,425,573	-		Pf6N2E2_4692	0.52	+0.4
5,425,573	-		Pf6N2E2_4692	0.52	-0.1
5,425,804	-		Pf6N2E2_4692	0.78	+0.4
5,426,020	+				-1.1
5,426,020	+				-0.6
5,426,020	+				+0.4
5,426,021	-				+0.4
5,426,073	+				-1.1
5,426,118	+				+0.4
5,426,118	+				-0.4
5,426,118	+				+0.4
5,426,118	+				-1.6
5,426,119	-				+0.4
5,426,119	-				-0.6
5,426,366	+		Pf6N2E2_4693	0.32	+0.4
5,426,366	+		Pf6N2E2_4693	0.32	-1.1
5,426,367	-		Pf6N2E2_4693	0.32	-1.0
5,426,570	+		Pf6N2E2_4693	0.53	-0.6
5,426,570	+		Pf6N2E2_4693	0.53	-0.5
5,426,570	+		Pf6N2E2_4693	0.53	-0.6
5,426,570	+		Pf6N2E2_4693	0.53	+0.4
5,426,570	+		Pf6N2E2_4693	0.53	+0.4
5,426,571	-		Pf6N2E2_4693	0.53	+0.4
5,426,571	-		Pf6N2E2_4693	0.53	+0.4
5,426,642	+		Pf6N2E2_4693	0.61	+0.4
5,426,642	+		Pf6N2E2_4693	0.61	-0.6
5,426,642	+		Pf6N2E2_4693	0.61	+0.4
5,426,643	-		Pf6N2E2_4693	0.61	-0.4
5,426,837	+		Pf6N2E2_4693	0.81	+0.4
5,426,986	+				-0.6
5,426,986	+				+0.4
5,426,987	-				+0.4
5,426,987	-				-0.6
5,426,987	-				-0.6
5,426,987	-				+0.4
5,427,032	+				-1.4
5,427,032	+				-0.6
5,427,032	+				+0.4
5,427,032	+				-0.6
5,427,033	-				-1.1
5,427,033	-				+0.4
5,427,076	-				+0.4
5,427,160	-				-0.6
5,427,657	+		Pf6N2E2_4694	0.48	+0.4
5,427,657	+		Pf6N2E2_4694	0.48	+0.3
5,427,658	-		Pf6N2E2_4694	0.49	+0.4
5,427,812	-		Pf6N2E2_4694	0.65	-1.0
5,427,973	+		Pf6N2E2_4694	0.82	-0.6
5,427,973	+		Pf6N2E2_4694	0.82	-0.9
5,427,974	-		Pf6N2E2_4694	0.82	+0.4