Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4653

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
5,383,203	-				-0.7
5,383,209	-				+0.1
5,383,209	-				-0.6
5,383,209	-				-0.6
5,383,213	-				-1.2
5,383,213	-				+0.4
5,383,213	-				-0.3
5,383,213	-				-1.2
5,383,213	-				-0.6
5,383,213	-				+0.4
5,383,332	-		Pf6N2E2_4653	0.20	-0.9
5,383,332	-		Pf6N2E2_4653	0.20	+0.4
5,383,332	-		Pf6N2E2_4653	0.20	-0.6
5,383,332	-		Pf6N2E2_4653	0.20	-0.6
5,383,332	-		Pf6N2E2_4653	0.20	-1.2
5,383,332	-		Pf6N2E2_4653	0.20	-1.6
5,383,431	-		Pf6N2E2_4653	0.30	-1.3
5,383,431	-		Pf6N2E2_4653	0.30	-1.6
5,383,493	-		Pf6N2E2_4653	0.36	-0.6
5,383,650	-		Pf6N2E2_4653	0.52	-1.9
5,383,650	-		Pf6N2E2_4653	0.52	-0.6
5,383,650	-		Pf6N2E2_4653	0.52	-0.3
5,383,650	-		Pf6N2E2_4653	0.52	-0.6
5,383,650	-		Pf6N2E2_4653	0.52	-0.6
5,383,779	-		Pf6N2E2_4653	0.65	-0.6
5,383,779	-		Pf6N2E2_4653	0.65	-1.2
5,383,779	-		Pf6N2E2_4653	0.65	-0.3
5,384,040	-				-0.6
5,384,040	-				+0.4
5,384,040	-				-1.4
5,384,124	-				-1.2
5,384,124	-				-0.6
5,384,132	-				-0.6
5,384,152	-				+0.4
5,384,165	-				-0.6
5,384,165	-				+0.4
5,384,165	-				-1.2
5,384,222	-		Pf6N2E2_4654	0.27	-0.6
5,384,252	+		Pf6N2E2_4654	0.40	-0.6
5,384,252	+		Pf6N2E2_4654	0.40	+0.4
5,384,253	-		Pf6N2E2_4654	0.41	-0.6
5,384,253	-		Pf6N2E2_4654	0.41	-1.2
5,384,253	-		Pf6N2E2_4654	0.41	+0.4
5,384,253	-		Pf6N2E2_4654	0.41	-0.6
5,384,253	-		Pf6N2E2_4654	0.41	-1.2
5,384,253	-		Pf6N2E2_4654	0.41	+0.4
5,384,253	-		Pf6N2E2_4654	0.41	+0.4
5,384,253	-		Pf6N2E2_4654	0.41	-1.6
5,384,295	+		Pf6N2E2_4654	0.59	+0.4
5,384,295	+		Pf6N2E2_4654	0.59	-0.6
5,384,295	+		Pf6N2E2_4654	0.59	+0.4
5,384,295	+		Pf6N2E2_4654	0.59	-0.6
5,384,296	-		Pf6N2E2_4654	0.60	-0.6
5,384,296	-		Pf6N2E2_4654	0.60	-3.0
5,384,296	-		Pf6N2E2_4654	0.60	+0.4
5,384,324	+		Pf6N2E2_4654	0.73	-0.1
5,384,324	+		Pf6N2E2_4654	0.73	-1.6
5,384,324	+		Pf6N2E2_4654	0.73	-0.6
5,384,325	-		Pf6N2E2_4654	0.73	-5.1
5,384,325	-		Pf6N2E2_4654	0.73	-1.9
5,384,387	+				+0.4