Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4425

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
5,154,019	+				+0.5
5,154,065	+		Pf6N2E2_4423	0.18	-1.9
5,154,066	-		Pf6N2E2_4423	0.18	+0.5
5,154,066	-		Pf6N2E2_4423	0.18	+0.5
5,154,066	-		Pf6N2E2_4423	0.18	+1.5
5,154,205	+		Pf6N2E2_4423	0.82	-0.9
5,154,242	+				+0.5
5,154,242	+				-1.9
5,154,243	-				+0.5
5,154,396	+				-1.2
5,154,396	+				-1.5
5,154,396	+				-0.5
5,154,396	+				-0.5
5,154,396	+				-0.9
5,154,396	+				-1.1
5,154,397	-				-1.1
5,154,397	-				+0.5
5,154,397	-				+0.5
5,154,397	-				-0.3
5,154,397	-				-0.5
5,154,397	-				+0.5
5,154,397	-				+0.5
5,154,397	-				-0.8
5,154,397	-				-0.5
5,154,397	-				-1.0
5,154,397	-				+0.5
5,154,397	-				-0.5
5,154,397	-				-0.5
5,154,397	-				+0.5
5,154,397	-				+0.3
5,154,397	-				-0.5
5,154,400	+				-0.7
5,154,425	+				-0.5
5,154,425	+				-0.5
5,154,426	-				-0.9
5,154,426	-				+0.0
5,154,429	+				+0.5
5,154,429	+				+0.5
5,154,429	+				+0.5
5,154,430	-				+0.5
5,154,430	-				-1.1
5,154,430	-				-0.5
5,154,442	+				+0.5
5,154,442	+				+0.5
5,154,443	-				+0.5
5,154,443	-				-0.4
5,154,443	-				+0.5
5,154,582	+				-0.4
5,154,582	+				-1.1
5,154,582	+				+0.5
5,154,582	+				-0.5
5,154,583	-				+0.5
5,154,583	-				+1.5
5,154,583	-				-0.9
5,154,755	+		Pf6N2E2_4424	0.51	-0.5
5,154,755	+		Pf6N2E2_4424	0.51	-0.5
5,154,755	+		Pf6N2E2_4424	0.51	+0.5
5,154,755	+		Pf6N2E2_4424	0.51	-0.7
5,154,756	-		Pf6N2E2_4424	0.51	-1.1
5,154,756	-		Pf6N2E2_4424	0.51	+0.5
5,154,773	+		Pf6N2E2_4424	0.55	-0.4
5,155,012	+				+0.5
5,155,012	+				-1.5
5,155,013	-				-0.5
5,155,013	-				-0.1
5,155,021	+				+0.9
5,155,021	+				-0.5
5,155,081	+				-1.3
5,155,081	+				-1.1
5,155,081	+				+1.5
5,155,081	+				+0.5
5,155,082	-				-0.5
5,155,082	-				-2.0
5,155,082	-				-0.4
5,155,082	-				-0.5
5,155,082	-				-0.5
5,155,082	-				-1.5
5,155,189	+				+0.5
5,155,189	+				-1.9
5,155,189	+				-0.5
5,155,190	-				-0.5
5,155,246	+				-0.5
5,155,246	+				-1.9
5,155,247	-				-0.5
5,155,247	-				+0.6
5,155,247	-				-0.4
5,155,247	-				-1.9
5,155,247	-				-0.5
5,155,323	+		Pf6N2E2_4425	0.13	+0.5
5,155,323	+		Pf6N2E2_4425	0.13	-0.5
5,155,324	-		Pf6N2E2_4425	0.13	-1.2
5,155,324	-		Pf6N2E2_4425	0.13	+0.5
5,155,333	+		Pf6N2E2_4425	0.13	-1.5
5,155,333	+		Pf6N2E2_4425	0.13	+0.5
5,155,333	+		Pf6N2E2_4425	0.13	-0.5
5,155,334	-		Pf6N2E2_4425	0.13	+0.5
5,155,419	+		Pf6N2E2_4425	0.16	-1.1
5,155,419	+		Pf6N2E2_4425	0.16	-0.5
5,155,420	-		Pf6N2E2_4425	0.16	+0.5
5,155,451	-		Pf6N2E2_4425	0.17	-1.5
5,155,495	+		Pf6N2E2_4425	0.19	-1.5
5,155,495	+		Pf6N2E2_4425	0.19	-1.1
5,155,495	+		Pf6N2E2_4425	0.19	+0.5
5,155,495	+		Pf6N2E2_4425	0.19	-0.4
5,155,495	+		Pf6N2E2_4425	0.19	-0.5
5,155,495	+		Pf6N2E2_4425	0.19	-1.9
5,155,495	+		Pf6N2E2_4425	0.19	-1.5
5,155,495	+		Pf6N2E2_4425	0.19	-1.1
5,155,496	-		Pf6N2E2_4425	0.19	+0.5
5,155,496	-		Pf6N2E2_4425	0.19	-2.1
5,155,496	-		Pf6N2E2_4425	0.19	+0.5
5,155,496	-		Pf6N2E2_4425	0.19	-0.9
5,155,618	+		Pf6N2E2_4425	0.23	+0.5
5,155,618	+		Pf6N2E2_4425	0.23	-0.4
5,155,618	+		Pf6N2E2_4425	0.23	+0.5
5,155,618	+		Pf6N2E2_4425	0.23	-0.5
5,155,618	+		Pf6N2E2_4425	0.23	+0.5
5,155,618	+		Pf6N2E2_4425	0.23	-0.5
5,155,619	-		Pf6N2E2_4425	0.23	-0.3
5,155,619	-		Pf6N2E2_4425	0.23	+0.5
5,155,619	-		Pf6N2E2_4425	0.23	-0.5
5,155,619	-		Pf6N2E2_4425	0.23	-0.5
5,155,619	-		Pf6N2E2_4425	0.23	-0.4
5,155,619	-		Pf6N2E2_4425	0.23	+0.5
5,155,642	+		Pf6N2E2_4425	0.24	-0.4
5,155,643	-		Pf6N2E2_4425	0.24	+0.5
5,155,714	+		Pf6N2E2_4425	0.26	-0.8
5,155,715	-		Pf6N2E2_4425	0.26	-1.1
5,155,885	+		Pf6N2E2_4425	0.32	+0.5
5,155,885	+		Pf6N2E2_4425	0.32	-0.9
5,155,886	-		Pf6N2E2_4425	0.32	+0.5
5,156,005	+		Pf6N2E2_4425	0.37	-0.5
5,156,005	+		Pf6N2E2_4425	0.37	-0.9
5,156,006	-		Pf6N2E2_4425	0.37	-1.1
5,156,006	-		Pf6N2E2_4425	0.37	+0.5
5,156,006	-		Pf6N2E2_4425	0.37	+0.5
5,156,006	-		Pf6N2E2_4425	0.37	-0.5
5,156,042	+		Pf6N2E2_4425	0.38	-0.3
5,156,079	+		Pf6N2E2_4425	0.39	-0.3
5,156,079	+		Pf6N2E2_4425	0.39	-0.3
5,156,079	+		Pf6N2E2_4425	0.39	+0.5
5,156,080	-		Pf6N2E2_4425	0.39	+0.5
5,156,080	-		Pf6N2E2_4425	0.39	+0.5
5,156,080	-		Pf6N2E2_4425	0.39	-0.5
5,156,080	-		Pf6N2E2_4425	0.39	-0.5
5,156,356	+		Pf6N2E2_4425	0.49	-0.5
5,156,356	+		Pf6N2E2_4425	0.49	-0.5
5,156,357	-		Pf6N2E2_4425	0.49	+0.5
5,156,357	-		Pf6N2E2_4425	0.49	+1.5
5,156,357	-		Pf6N2E2_4425	0.49	-0.5
5,156,357	-		Pf6N2E2_4425	0.49	-0.2
5,156,357	-		Pf6N2E2_4425	0.49	-0.5
5,156,491	+		Pf6N2E2_4425	0.54	+0.0
5,156,491	+		Pf6N2E2_4425	0.54	-0.1
5,156,491	+		Pf6N2E2_4425	0.54	-1.2
5,156,492	-		Pf6N2E2_4425	0.54	-0.5
5,156,732	+		Pf6N2E2_4425	0.62	+0.2
5,156,771	-		Pf6N2E2_4425	0.64	-0.0
5,156,824	+		Pf6N2E2_4425	0.65	-0.5
5,156,824	+		Pf6N2E2_4425	0.65	-0.3
5,156,824	+		Pf6N2E2_4425	0.65	+0.5
5,156,824	+		Pf6N2E2_4425	0.65	+0.9
5,156,825	-		Pf6N2E2_4425	0.65	+0.3
5,156,825	-		Pf6N2E2_4425	0.65	+0.5
5,156,854	+		Pf6N2E2_4425	0.66	-0.5
5,156,854	+		Pf6N2E2_4425	0.66	+0.5
5,156,854	+		Pf6N2E2_4425	0.66	-1.5
5,156,854	+		Pf6N2E2_4425	0.66	+0.5
5,156,854	+		Pf6N2E2_4425	0.66	-0.5
5,156,854	+		Pf6N2E2_4425	0.66	+0.5
5,156,854	+		Pf6N2E2_4425	0.66	+0.5
5,156,854	+		Pf6N2E2_4425	0.66	+0.1
5,156,855	-		Pf6N2E2_4425	0.67	+0.5
5,156,855	-		Pf6N2E2_4425	0.67	-1.1
5,156,855	-		Pf6N2E2_4425	0.67	-0.4
5,156,855	-		Pf6N2E2_4425	0.67	+0.5
5,156,855	-		Pf6N2E2_4425	0.67	+0.5
5,156,893	-		Pf6N2E2_4425	0.68	+0.5
5,156,947	+		Pf6N2E2_4425	0.70	-1.1
5,156,947	+		Pf6N2E2_4425	0.70	+0.5
5,156,947	+		Pf6N2E2_4425	0.70	-1.4
5,156,947	+		Pf6N2E2_4425	0.70	-0.5
5,156,947	+		Pf6N2E2_4425	0.70	+0.5
5,156,948	-		Pf6N2E2_4425	0.70	-0.5
5,156,948	-		Pf6N2E2_4425	0.70	+0.5
5,156,983	+		Pf6N2E2_4425	0.71	-1.1
5,156,984	-		Pf6N2E2_4425	0.71	-0.5
5,156,997	-		Pf6N2E2_4425	0.72	-0.5
5,157,049	+		Pf6N2E2_4425	0.73	+0.5
5,157,049	+		Pf6N2E2_4425	0.73	+0.5
5,157,049	+		Pf6N2E2_4425	0.73	-0.5
5,157,049	+		Pf6N2E2_4425	0.73	+0.5
5,157,050	-		Pf6N2E2_4425	0.73	-1.1
5,157,050	-		Pf6N2E2_4425	0.73	+1.5
5,157,050	-		Pf6N2E2_4425	0.73	-0.6
5,157,110	+		Pf6N2E2_4425	0.75	+0.5
5,157,110	+		Pf6N2E2_4425	0.75	+0.5
5,157,111	-		Pf6N2E2_4425	0.76	-1.9
5,157,111	-		Pf6N2E2_4425	0.76	+0.5
5,157,118	+		Pf6N2E2_4425	0.76	+0.0
5,157,118	+		Pf6N2E2_4425	0.76	-0.5
5,157,118	+		Pf6N2E2_4425	0.76	-0.5
5,157,118	+		Pf6N2E2_4425	0.76	-0.5
5,157,118	+		Pf6N2E2_4425	0.76	-1.7
5,157,118	+		Pf6N2E2_4425	0.76	+0.5
5,157,118	+		Pf6N2E2_4425	0.76	-0.5
5,157,118	+		Pf6N2E2_4425	0.76	-2.1
5,157,118	+		Pf6N2E2_4425	0.76	-1.4
5,157,118	+		Pf6N2E2_4425	0.76	-1.1
5,157,118	+		Pf6N2E2_4425	0.76	-0.3
5,157,118	+		Pf6N2E2_4425	0.76	+0.5
5,157,119	-		Pf6N2E2_4425	0.76	+0.5
5,157,119	-		Pf6N2E2_4425	0.76	-1.1
5,157,119	-		Pf6N2E2_4425	0.76	-0.5
5,157,119	-		Pf6N2E2_4425	0.76	-0.5
5,157,119	-		Pf6N2E2_4425	0.76	-0.2
5,157,119	-		Pf6N2E2_4425	0.76	+0.5
5,157,119	-		Pf6N2E2_4425	0.76	-0.7
5,157,119	-		Pf6N2E2_4425	0.76	-0.5
5,157,119	-		Pf6N2E2_4425	0.76	+0.5
5,157,119	-		Pf6N2E2_4425	0.76	-1.5
5,157,127	+		Pf6N2E2_4425	0.76	+0.0
5,157,127	+		Pf6N2E2_4425	0.76	+0.5
5,157,127	+		Pf6N2E2_4425	0.76	+0.5
5,157,127	+		Pf6N2E2_4425	0.76	-1.5
5,157,127	+		Pf6N2E2_4425	0.76	-0.4
5,157,127	+		Pf6N2E2_4425	0.76	-0.1
5,157,127	+		Pf6N2E2_4425	0.76	+0.5
5,157,127	+		Pf6N2E2_4425	0.76	-0.5
5,157,127	+		Pf6N2E2_4425	0.76	-1.1
5,157,128	-		Pf6N2E2_4425	0.76	-1.2
5,157,128	-		Pf6N2E2_4425	0.76	+0.5
5,157,128	-		Pf6N2E2_4425	0.76	+0.5
5,157,128	-		Pf6N2E2_4425	0.76	-0.5
5,157,142	+		Pf6N2E2_4425	0.77	-0.5
5,157,142	+		Pf6N2E2_4425	0.77	+0.5
5,157,142	+		Pf6N2E2_4425	0.77	-1.5
5,157,142	+		Pf6N2E2_4425	0.77	-0.5
5,157,143	-		Pf6N2E2_4425	0.77	-0.2
5,157,143	-		Pf6N2E2_4425	0.77	+0.5
5,157,199	+		Pf6N2E2_4425	0.79	+0.5
5,157,199	+		Pf6N2E2_4425	0.79	-0.5
5,157,220	+		Pf6N2E2_4425	0.79	+0.5
5,157,220	+		Pf6N2E2_4425	0.79	-1.0
5,157,220	+		Pf6N2E2_4425	0.79	-1.1
5,157,220	+		Pf6N2E2_4425	0.79	-1.5
5,157,220	+		Pf6N2E2_4425	0.79	+0.5
5,157,220	+		Pf6N2E2_4425	0.79	-0.4
5,157,221	-		Pf6N2E2_4425	0.79	-0.1
5,157,221	-		Pf6N2E2_4425	0.79	+0.5
5,157,221	-		Pf6N2E2_4425	0.79	+0.5
5,157,221	-		Pf6N2E2_4425	0.79	+0.5
5,157,221	-		Pf6N2E2_4425	0.79	-0.5
5,157,221	-		Pf6N2E2_4425	0.79	+0.5
5,157,221	-		Pf6N2E2_4425	0.79	+0.5
5,157,514	+		Pf6N2E2_4425	0.90	-0.1
5,157,515	-		Pf6N2E2_4425	0.90	-1.1
5,157,515	-		Pf6N2E2_4425	0.90	-0.5
5,157,515	-		Pf6N2E2_4425	0.90	-0.5
5,157,554	+				-0.9
5,157,572	-				+0.5
5,157,572	-				-1.5
5,157,572	-				-0.4
5,157,607	+				+0.5
5,157,786	+				-1.1
5,157,787	-				-0.5
5,157,787	-				-0.1
5,157,911	-				-0.7
5,157,911	-				+0.5
5,157,998	+				+0.5
5,157,998	+				-1.1
5,157,998	+				+0.5
5,157,999	-		Pf6N2E2_4426	0.10	-0.1
5,157,999	-		Pf6N2E2_4426	0.10	-1.0
5,157,999	-		Pf6N2E2_4426	0.10	+0.5
5,157,999	-		Pf6N2E2_4426	0.10	-0.5
5,157,999	-		Pf6N2E2_4426	0.10	-0.5
5,158,016	+		Pf6N2E2_4426	0.17	-1.3
5,158,016	+		Pf6N2E2_4426	0.17	-0.5
5,158,016	+		Pf6N2E2_4426	0.17	-0.3
5,158,016	+		Pf6N2E2_4426	0.17	-0.5
5,158,219	+				-0.5
5,158,219	+				+1.0
5,158,219	+				-1.0
5,158,219	+				-0.5
5,158,219	+				-1.1
5,158,220	-				-1.5
5,158,220	-				+0.5
5,158,220	-				+0.5
5,158,220	-				-0.5
5,158,220	-				+0.5
5,158,220	-				-0.5
5,158,220	-				-0.4
5,158,220	-				-2.1
5,158,220	-				-0.5
5,158,220	-				-0.5
5,158,238	-				-1.1
5,158,261	+				-1.5
5,158,261	+				-0.5
5,158,261	+				+0.5
5,158,261	+				-1.5
5,158,262	-				+0.5
5,158,262	-				-1.1
5,158,262	-				+0.5
5,158,262	-				-0.5
5,158,377	+				-0.5
5,158,377	+				-0.5
5,158,377	+				+0.5
5,158,377	+				+0.1
5,158,378	-				-1.1
5,158,378	-				+0.5
5,158,378	-				+0.5
5,158,446	+				+0.5
5,158,446	+				-0.5
5,158,494	+		Pf6N2E2_4427	0.17	-0.2
5,158,591	-		Pf6N2E2_4427	0.51	-0.5
5,158,761	-				-0.5
5,158,761	-				-0.5
5,158,761	-				+0.5
5,158,761	-				-1.5
5,158,797	+				+0.5
5,158,797	+				-1.3
5,158,798	-				-1.1