Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4419

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
5,151,261	-				-1.1
5,151,262	+				-2.1
5,151,263	-				-2.1
5,151,263	-				+0.5
5,151,907	-		Pf6N2E2_4418	0.81	+0.5
5,152,054	-				+0.5
5,153,332	-				+0.5
5,153,335	-				+0.5
5,153,335	-				-0.5
5,153,335	-				-0.3
5,153,335	-				-0.5
5,153,335	-				-1.1
5,153,335	-				-0.5
5,153,335	-				-0.5
5,153,335	-				+0.5
5,153,335	-				-1.1
5,153,335	-				+0.5
5,153,541	-		Pf6N2E2_4421	0.41	+0.5
5,153,541	-		Pf6N2E2_4421	0.41	+0.5
5,153,543	-		Pf6N2E2_4421	0.42	-0.4
5,153,566	-		Pf6N2E2_4421	0.51	-0.5
5,153,611	+		Pf6N2E2_4421	0.68	-0.3
5,153,612	-		Pf6N2E2_4421	0.69	-1.7
5,153,612	-		Pf6N2E2_4421	0.69	-1.5
5,153,613	+		Pf6N2E2_4421	0.69	+0.5
5,153,614	-		Pf6N2E2_4421	0.69	-0.5
5,153,614	-		Pf6N2E2_4421	0.69	-1.1
5,153,614	-		Pf6N2E2_4421	0.69	-1.8
5,153,642	+		Pf6N2E2_4421	0.80	-0.5
5,153,642	+		Pf6N2E2_4421	0.80	+0.5
5,153,643	-		Pf6N2E2_4421	0.81	-1.1
5,153,801	+		Pf6N2E2_4422	0.34	+0.5
5,153,801	+		Pf6N2E2_4422	0.34	+0.5
5,153,905	+		Pf6N2E2_4422	0.65	-0.5
5,153,906	-		Pf6N2E2_4422	0.65	-0.5
5,154,019	+				+0.5
5,154,065	+		Pf6N2E2_4423	0.18	-1.9
5,154,066	-		Pf6N2E2_4423	0.18	+0.5
5,154,066	-		Pf6N2E2_4423	0.18	+0.5
5,154,066	-		Pf6N2E2_4423	0.18	+1.5
5,154,205	+		Pf6N2E2_4423	0.82	-0.9
5,154,242	+				+0.5
5,154,242	+				-1.9
5,154,243	-				+0.5