Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4083

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
4,759,566	-		Pf6N2E2_4083	0.70	-3.1
4,759,606	-		Pf6N2E2_4083	0.90	+0.4
4,759,606	-		Pf6N2E2_4083	0.90	-0.6
4,759,606	-		Pf6N2E2_4083	0.90	-1.9
4,759,606	-		Pf6N2E2_4083	0.90	-0.8
4,759,606	-		Pf6N2E2_4083	0.90	-0.6
4,759,673	+				-0.6
4,759,674	-				+0.4
4,759,905	+				+0.4
4,759,905	+				-0.6
4,759,905	+				+0.4
4,760,256	+		Pf6N2E2_4084	0.27	-0.2
4,760,257	-				-0.9
4,760,257	-		Pf6N2E2_4084	0.27	+0.3
4,760,332	-		Pf6N2E2_4084	0.35	-1.2
4,760,481	+		Pf6N2E2_4084	0.51	-0.2
4,760,481	+		Pf6N2E2_4084	0.51	-0.2
4,760,482	-		Pf6N2E2_4084	0.51	-0.6
4,760,482	-		Pf6N2E2_4084	0.51	-0.1
4,760,482	-		Pf6N2E2_4084	0.51	-0.4