Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3869

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
4,500,296	+		Pf6N2E2_3868	0.30	-2.4
4,500,296	+		Pf6N2E2_3868	0.30	+0.4
4,500,296	+		Pf6N2E2_3868	0.30	-0.6
4,500,297	-		Pf6N2E2_3868	0.30	+0.4
4,500,361	-		Pf6N2E2_3868	0.37	-0.6
4,500,361	-		Pf6N2E2_3868	0.37	-1.6
4,500,361	-		Pf6N2E2_3868	0.37	-1.1
4,500,654	+		Pf6N2E2_3868	0.69	-1.9
4,500,654	+		Pf6N2E2_3868	0.69	+0.4
4,500,654	+		Pf6N2E2_3868	0.69	+0.4
4,500,654	+		Pf6N2E2_3868	0.69	+0.4
4,500,654	+		Pf6N2E2_3868	0.69	-1.1
4,500,654	+		Pf6N2E2_3868	0.69	+0.4
4,500,654	+		Pf6N2E2_3868	0.69	+0.4
4,500,654	+		Pf6N2E2_3868	0.69	-2.0
4,500,655	-		Pf6N2E2_3868	0.69	-0.6
4,500,655	-		Pf6N2E2_3868	0.69	-1.6
4,500,655	-		Pf6N2E2_3868	0.69	+0.4
4,500,655	-		Pf6N2E2_3868	0.69	-1.1
4,500,871	+				-1.1
4,500,872	-				+0.4
4,500,872	-				-2.1
4,500,919	+				-0.6
4,500,919	+				+0.4
4,500,919	+				-0.6
4,500,920	-				+0.4
4,500,920	-				+0.4
4,500,920	-				+0.4
4,500,920	-				+0.4
4,500,920	-				-2.9
4,500,927	+				-1.9
4,500,927	+				-4.0
4,500,927	+				-1.1
4,500,927	+				+0.4
4,500,927	+				+0.4
4,500,927	+				+0.4
4,500,928	-				-0.6
4,500,928	-				-0.6
4,500,928	-				-2.8
4,500,928	-				+0.4
4,500,928	-				-1.6
4,500,949	+				+0.4
4,500,950	-				+0.4
4,500,950	-				-3.0
4,500,972	+				-0.6
4,500,972	+				-1.9
4,500,973	-				-1.1
4,500,973	-				-0.6
4,500,973	-				-2.6
4,500,973	-				-0.6
4,501,037	-				-0.8
4,501,037	-				-1.9
4,501,037	-				-0.6
4,501,055	+				-0.6
4,501,056	-				+0.4
4,501,163	+				+0.4
4,501,163	+				+0.4
4,501,163	+				-0.6
4,501,163	+				-0.6
4,501,164	-				+0.4
4,501,164	-				+0.4
4,501,164	-				-1.6
4,501,164	-				-0.6
4,501,305	+		Pf6N2E2_3869	0.23	-0.6
4,501,305	+		Pf6N2E2_3869	0.23	-1.9
4,501,305	+		Pf6N2E2_3869	0.23	+0.4
4,501,305	+		Pf6N2E2_3869	0.23	-0.6
4,501,305	+		Pf6N2E2_3869	0.23	-0.9
4,501,305	+		Pf6N2E2_3869	0.23	+0.4
4,501,305	+		Pf6N2E2_3869	0.23	-1.6
4,501,306	-		Pf6N2E2_3869	0.23	-1.1
4,501,306	-		Pf6N2E2_3869	0.23	+0.4
4,501,306	-		Pf6N2E2_3869	0.23	+0.4
4,501,306	-		Pf6N2E2_3869	0.23	-2.6
4,501,306	-		Pf6N2E2_3869	0.23	-0.6
4,501,306	-		Pf6N2E2_3869	0.23	-0.6
4,501,306	-		Pf6N2E2_3869	0.23	+0.4
4,501,306	-		Pf6N2E2_3869	0.23	+0.4
4,501,306	-		Pf6N2E2_3869	0.23	-1.1
4,501,329	+		Pf6N2E2_3869	0.26	+0.4
4,501,329	+		Pf6N2E2_3869	0.26	+0.4
4,501,342	-		Pf6N2E2_3869	0.28	-0.6
4,501,342	-		Pf6N2E2_3869	0.28	-0.6
4,501,362	+		Pf6N2E2_3869	0.31	+0.4
4,501,373	+		Pf6N2E2_3869	0.32	-2.2
4,501,373	+		Pf6N2E2_3869	0.32	-0.6
4,501,373	+		Pf6N2E2_3869	0.32	+0.4
4,501,373	+		Pf6N2E2_3869	0.32	-0.6
4,501,373	+		Pf6N2E2_3869	0.32	+0.4
4,501,373	+		Pf6N2E2_3869	0.32	+0.4
4,501,373	+		Pf6N2E2_3869	0.32	+0.4
4,501,374	-		Pf6N2E2_3869	0.32	+0.4
4,501,374	-		Pf6N2E2_3869	0.32	+0.4
4,501,374	-		Pf6N2E2_3869	0.32	+0.4
4,501,374	-		Pf6N2E2_3869	0.32	-0.6
4,501,569	+		Pf6N2E2_3869	0.60	+0.4
4,501,569	+		Pf6N2E2_3869	0.60	+0.4
4,501,569	+		Pf6N2E2_3869	0.60	-3.5
4,501,569	+		Pf6N2E2_3869	0.60	-1.6
4,501,570	-		Pf6N2E2_3869	0.60	-3.1
4,501,570	-		Pf6N2E2_3869	0.60	+0.4
4,501,570	-		Pf6N2E2_3869	0.60	-1.1
4,501,570	-		Pf6N2E2_3869	0.60	-0.6
4,501,612	+		Pf6N2E2_3869	0.66	-1.1
4,501,612	+		Pf6N2E2_3869	0.66	-2.9
4,501,771	-		Pf6N2E2_3869	0.88	+0.4
4,501,771	-		Pf6N2E2_3869	0.88	-1.1
4,501,805	-				-0.6
4,501,855	+				-2.2
4,501,855	+				+0.4
4,501,855	+				-2.1
4,501,856	-				+0.4
4,501,856	-				-1.1
4,501,932	+		Pf6N2E2_3870	0.18	+0.4
4,501,933	-		Pf6N2E2_3870	0.18	-0.6
4,501,933	-		Pf6N2E2_3870	0.18	-0.6
4,502,130	-		Pf6N2E2_3870	0.63	-0.9
4,502,406	+		Pf6N2E2_3871	0.14	+0.4
4,502,406	+		Pf6N2E2_3871	0.14	-2.5
4,502,406	+		Pf6N2E2_3871	0.14	-1.1
4,502,407	-		Pf6N2E2_3871	0.14	-0.6
4,502,407	-		Pf6N2E2_3871	0.14	-0.6
4,502,457	+		Pf6N2E2_3871	0.21	+0.4
4,502,457	+		Pf6N2E2_3871	0.21	+0.4
4,502,458	-		Pf6N2E2_3871	0.21	-0.7
4,502,494	-		Pf6N2E2_3871	0.26	-1.7
4,502,682	+		Pf6N2E2_3871	0.51	-2.8
4,502,778	+		Pf6N2E2_3871	0.64	+0.4
4,502,778	+		Pf6N2E2_3871	0.64	-0.6
4,502,778	+		Pf6N2E2_3871	0.64	+0.4
4,502,778	+		Pf6N2E2_3871	0.64	+0.4
4,502,778	+		Pf6N2E2_3871	0.64	+0.4
4,502,778	+		Pf6N2E2_3871	0.64	-0.6
4,502,778	+		Pf6N2E2_3871	0.64	-0.6
4,502,778	+		Pf6N2E2_3871	0.64	-1.4
4,502,778	+		Pf6N2E2_3871	0.64	-0.6
4,502,778	+		Pf6N2E2_3871	0.64	-1.9
4,502,778	+		Pf6N2E2_3871	0.64	+0.4
4,502,778	+		Pf6N2E2_3871	0.64	-1.1
4,502,778	+		Pf6N2E2_3871	0.64	-1.1
4,502,779	-		Pf6N2E2_3871	0.64	-0.6
4,502,779	-		Pf6N2E2_3871	0.64	-0.6
4,502,779	-		Pf6N2E2_3871	0.64	+0.4
4,502,779	-		Pf6N2E2_3871	0.64	-0.6
4,502,779	-		Pf6N2E2_3871	0.64	-1.1
4,502,779	-		Pf6N2E2_3871	0.64	+0.4
4,502,779	-		Pf6N2E2_3871	0.64	+0.4
4,502,779	-		Pf6N2E2_3871	0.64	-1.1
4,502,779	-		Pf6N2E2_3871	0.64	-0.6
4,502,779	-		Pf6N2E2_3871	0.64	+0.4
4,502,779	-		Pf6N2E2_3871	0.64	-0.6
4,502,805	+		Pf6N2E2_3871	0.67	-1.3
4,502,805	+		Pf6N2E2_3871	0.67	+0.4
4,502,806	-		Pf6N2E2_3871	0.67	-0.6
4,502,806	-		Pf6N2E2_3871	0.67	+0.4
4,502,806	-		Pf6N2E2_3871	0.67	-1.1
4,502,806	-		Pf6N2E2_3871	0.67	-1.1
4,502,806	-		Pf6N2E2_3871	0.67	+0.4
4,502,806	-		Pf6N2E2_3871	0.67	-2.1
4,502,842	+		Pf6N2E2_3871	0.72	-1.9
4,502,842	+		Pf6N2E2_3871	0.72	+0.4
4,502,843	-				+0.4
4,502,850	+		Pf6N2E2_3871	0.73	+0.4
4,502,851	-		Pf6N2E2_3871	0.73	+0.4
4,502,851	-		Pf6N2E2_3871	0.73	+0.4