Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3783

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
4,405,449	+				-1.6
4,405,449	+				-1.5
4,405,449	+				-1.5
4,405,449	+				-0.5
4,405,449	+				+0.5
4,405,449	+				-0.5
4,405,449	+				-1.1
4,405,450	-				-5.2
4,405,450	-				-6.1
4,405,450	-				-5.7
4,405,450	-				-5.1
4,405,450	-				-3.8
4,405,450	-				-7.4
4,405,453	+				+0.5
4,405,453	+				-0.5
4,405,453	+				-0.5
4,405,453	+				-0.8
4,405,453	+				+0.5
4,405,453	+				-0.5
4,405,453	+				-0.5
4,405,453	+				-0.5
4,405,453	+				-0.5
4,405,453	+				-0.5
4,405,453	+				-1.5
4,405,453	+				+0.5
4,405,453	+				-0.5
4,405,453	+				-0.5
4,405,454	-				-2.5
4,405,454	-				-5.5
4,405,454	-				-3.6
4,405,454	-				-2.3
4,405,454	-				-6.2
4,405,457	+				-0.4
4,405,457	+				-0.5
4,405,457	+				+0.5
4,405,457	+				+0.5
4,405,457	+				-1.1
4,405,457	+				+0.7
4,405,457	+				+0.5
4,405,457	+				-1.1
4,405,458	-				-4.3
4,405,458	-				-3.2
4,405,458	-				-5.2
4,405,488	+				+0.5
4,405,488	+				-0.5
4,405,665	+		Pf6N2E2_3782	0.37	-0.5
4,405,665	+		Pf6N2E2_3782	0.37	+0.5
4,405,665	+		Pf6N2E2_3782	0.37	+0.5
4,405,666	-		Pf6N2E2_3782	0.37	-6.1
4,405,666	-		Pf6N2E2_3782	0.37	-4.5
4,405,666	-		Pf6N2E2_3782	0.37	-5.8
4,405,666	-		Pf6N2E2_3782	0.37	-7.3
4,405,666	-		Pf6N2E2_3782	0.37	-5.3
4,405,828	-		Pf6N2E2_3782	0.78	-5.6
4,405,893	+				-0.5
4,405,893	+				-1.5
4,405,894	-				-3.5
4,405,894	-				-5.0
4,405,904	+				-1.1
4,405,904	+				-7.9
4,405,904	+				-7.6
4,405,905	-				-4.7
4,405,905	-				-5.2
4,405,905	-				-5.9
4,405,905	-				-3.7
4,405,905	-				-0.5
4,405,905	-				-3.4
4,405,905	-				-3.8
4,405,978	+		Pf6N2E2_3783	0.21	-4.3
4,405,979	-		Pf6N2E2_3783	0.21	-3.1
4,405,979	-		Pf6N2E2_3783	0.21	-5.2
4,406,101	+		Pf6N2E2_3783	0.58	-6.7
4,406,101	+		Pf6N2E2_3783	0.58	+0.5
4,406,101	+		Pf6N2E2_3783	0.58	-6.9
4,406,101	+		Pf6N2E2_3783	0.58	-3.5
4,406,101	+		Pf6N2E2_3783	0.58	+0.5
4,406,102	-		Pf6N2E2_3783	0.58	+0.5
4,406,271	+				-0.9
4,406,562	+				-1.8
4,406,562	+				-2.3
4,406,562	+				-1.4
4,406,764	+		Pf6N2E2_3785	0.47	-0.5
4,406,764	+		Pf6N2E2_3785	0.47	-2.3
4,406,764	+		Pf6N2E2_3785	0.47	-2.6
4,406,764	+		Pf6N2E2_3785	0.47	-1.9
4,406,764	+		Pf6N2E2_3785	0.47	-2.7
4,406,764	+		Pf6N2E2_3785	0.47	-2.4
4,406,765	-		Pf6N2E2_3785	0.48	-1.5
4,406,928	+		Pf6N2E2_3785	0.86	-2.5
4,406,928	+		Pf6N2E2_3785	0.86	+0.5
4,406,928	+		Pf6N2E2_3785	0.86	+0.5
4,406,928	+		Pf6N2E2_3785	0.86	-0.8
4,406,928	+		Pf6N2E2_3785	0.86	+0.5
4,406,928	+		Pf6N2E2_3785	0.86	-1.5
4,406,928	+		Pf6N2E2_3785	0.86	-1.1
4,406,962	+				-1.1
4,406,962	+				-0.3
4,406,962	+				-0.5