Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3751

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
4,366,851	-				-1.1
4,366,855	-				+0.5
4,366,855	-				+0.5
4,366,855	-				-0.5
4,366,878	-				+0.5
4,366,892	-				+0.5
4,366,892	-				-0.5
4,366,892	-				-0.3
4,366,892	-				+0.5
4,367,127	-				-1.9
4,367,378	+		Pf6N2E2_3751	0.27	-0.5
4,367,378	+		Pf6N2E2_3751	0.27	+0.5
4,367,379	-		Pf6N2E2_3751	0.27	-0.5
4,367,379	-		Pf6N2E2_3751	0.27	-1.1
4,367,456	+		Pf6N2E2_3751	0.32	+0.5
4,367,634	-		Pf6N2E2_3751	0.45	+0.5
4,367,675	+		Pf6N2E2_3751	0.48	+0.5
4,367,675	+		Pf6N2E2_3751	0.48	-0.5
4,367,675	+		Pf6N2E2_3751	0.48	-2.5
4,367,675	+		Pf6N2E2_3751	0.48	+0.5
4,367,675	+		Pf6N2E2_3751	0.48	+0.5
4,367,675	+		Pf6N2E2_3751	0.48	-3.5
4,367,675	+		Pf6N2E2_3751	0.48	+0.5
4,367,675	+		Pf6N2E2_3751	0.48	+0.5
4,367,675	+		Pf6N2E2_3751	0.48	-0.5
4,367,676	-		Pf6N2E2_3751	0.48	-7.2
4,367,676	-		Pf6N2E2_3751	0.48	+0.5
4,367,676	-		Pf6N2E2_3751	0.48	-0.5
4,367,676	-		Pf6N2E2_3751	0.48	+0.5
4,367,676	-		Pf6N2E2_3751	0.48	-3.9
4,367,676	-		Pf6N2E2_3751	0.48	-7.2
4,367,676	-		Pf6N2E2_3751	0.48	-4.1
4,367,676	-		Pf6N2E2_3751	0.48	-2.3
4,367,676	-		Pf6N2E2_3751	0.48	-0.5
4,367,681	+		Pf6N2E2_3751	0.48	-1.9
4,367,681	+		Pf6N2E2_3751	0.48	+0.5
4,367,681	+		Pf6N2E2_3751	0.48	-1.9
4,367,681	+		Pf6N2E2_3751	0.48	-1.1
4,367,681	+		Pf6N2E2_3751	0.48	-4.4
4,367,681	+		Pf6N2E2_3751	0.48	-4.3
4,367,681	+		Pf6N2E2_3751	0.48	+0.5
4,367,682	-		Pf6N2E2_3751	0.48	-0.5
4,367,682	-		Pf6N2E2_3751	0.48	+0.5
4,367,682	-		Pf6N2E2_3751	0.48	-7.2
4,367,682	-		Pf6N2E2_3751	0.48	+0.5
4,367,711	+		Pf6N2E2_3751	0.50	-0.5
4,367,711	+		Pf6N2E2_3751	0.50	-3.1
4,367,711	+		Pf6N2E2_3751	0.50	+0.5
4,367,712	-		Pf6N2E2_3751	0.50	-0.5
4,368,032	+		Pf6N2E2_3751	0.73	-6.9
4,368,032	+		Pf6N2E2_3751	0.73	+0.5
4,368,032	+		Pf6N2E2_3751	0.73	-1.1
4,368,032	+		Pf6N2E2_3751	0.73	-3.4
4,368,032	+		Pf6N2E2_3751	0.73	-0.5
4,368,032	+		Pf6N2E2_3751	0.73	+0.5
4,368,032	+		Pf6N2E2_3751	0.73	-7.1
4,368,032	+		Pf6N2E2_3751	0.73	-7.8
4,368,032	+		Pf6N2E2_3751	0.73	+0.5
4,368,033	-		Pf6N2E2_3751	0.73	-1.1
4,368,033	-		Pf6N2E2_3751	0.73	-1.9
4,368,033	-		Pf6N2E2_3751	0.73	+0.5
4,368,033	-		Pf6N2E2_3751	0.73	+0.5
4,368,033	-		Pf6N2E2_3751	0.73	-7.9
4,368,312	-				-3.1
4,368,312	-				-4.6
4,368,312	-				-1.1
4,368,418	+				+0.5
4,368,418	+				-4.0
4,368,418	+				-1.1
4,368,418	+				+0.5
4,368,419	-				-4.4
4,368,446	+				+0.5
4,368,530	+				+0.5
4,368,531	-				-1.9
4,368,531	-				-0.5
4,368,587	+				-4.0
4,368,588	-				+0.5
4,368,588	-				+0.5
4,368,588	-				+0.5
4,368,588	-				-1.1
4,368,710	+				-1.1
4,368,744	+				-0.5
4,368,744	+				+0.5
4,368,744	+				+0.5
4,368,745	-				-0.5
4,368,745	-				-1.1
4,368,788	+				-1.5
4,368,788	+				-0.5
4,368,789	-				-5.2
4,368,840	+				-2.3
4,368,944	+		Pf6N2E2_3752	0.11	+0.5
4,368,944	+		Pf6N2E2_3752	0.11	+0.5
4,368,944	+		Pf6N2E2_3752	0.11	-1.1
4,368,945	-		Pf6N2E2_3752	0.11	-3.4
4,368,945	-		Pf6N2E2_3752	0.11	+0.5
4,369,004	+		Pf6N2E2_3752	0.12	-0.5
4,369,004	+		Pf6N2E2_3752	0.12	-1.1
4,369,005	-		Pf6N2E2_3752	0.13	-8.0
4,369,028	+		Pf6N2E2_3752	0.13	-6.9
4,369,028	+		Pf6N2E2_3752	0.13	+0.5
4,369,028	+		Pf6N2E2_3752	0.13	-1.1
4,369,028	+		Pf6N2E2_3752	0.13	+0.5
4,369,028	+		Pf6N2E2_3752	0.13	-3.9
4,369,028	+		Pf6N2E2_3752	0.13	-1.1
4,369,028	+		Pf6N2E2_3752	0.13	-0.5
4,369,029	-		Pf6N2E2_3752	0.13	+0.5
4,369,029	-		Pf6N2E2_3752	0.13	-0.4
4,369,029	-		Pf6N2E2_3752	0.13	+0.5
4,369,029	-		Pf6N2E2_3752	0.13	-1.5
4,369,029	-		Pf6N2E2_3752	0.13	+0.5
4,369,029	-		Pf6N2E2_3752	0.13	-2.5
4,369,029	-		Pf6N2E2_3752	0.13	-3.9
4,369,029	-		Pf6N2E2_3752	0.13	-1.9
4,369,029	-		Pf6N2E2_3752	0.13	+0.5
4,369,029	-		Pf6N2E2_3752	0.13	+0.5
4,369,029	-		Pf6N2E2_3752	0.13	-0.5
4,369,029	-		Pf6N2E2_3752	0.13	-0.5
4,369,186	-		Pf6N2E2_3752	0.17	-1.1
4,369,322	+		Pf6N2E2_3752	0.20	-5.1
4,369,322	+		Pf6N2E2_3752	0.20	+0.5
4,369,323	-		Pf6N2E2_3752	0.20	-1.1