Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3557

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
4,147,912	+		Pf6N2E2_3556	0.77	+0.4
4,147,912	+		Pf6N2E2_3556	0.77	-1.2
4,147,912	+		Pf6N2E2_3556	0.77	+0.8
4,147,912	+		Pf6N2E2_3556	0.77	-1.9
4,147,913	-		Pf6N2E2_3556	0.77	-1.2
4,147,924	+		Pf6N2E2_3556	0.77	-1.2
4,147,924	+		Pf6N2E2_3556	0.77	+0.4
4,147,924	+		Pf6N2E2_3556	0.77	+0.4
4,147,924	+		Pf6N2E2_3556	0.77	-0.5
4,147,924	+		Pf6N2E2_3556	0.77	-0.3
4,147,925	-		Pf6N2E2_3556	0.77	-2.2
4,147,925	-		Pf6N2E2_3556	0.77	-0.3
4,147,925	-		Pf6N2E2_3556	0.77	-0.8
4,147,925	-		Pf6N2E2_3556	0.77	-0.6
4,147,925	-		Pf6N2E2_3556	0.77	-1.2
4,147,925	-		Pf6N2E2_3556	0.77	-1.2
4,148,293	+				+0.2
4,148,294	-				-1.6
4,148,294	-				-0.6
4,148,326	+				-1.2
4,148,326	+				-1.2
4,148,326	+				-0.1
4,148,326	+				-0.5
4,148,327	-				+0.4
4,148,327	-				+0.4
4,148,327	-				+0.4
4,148,327	-				-1.6
4,148,395	+				-1.4
4,148,550	+				-0.3
4,148,550	+				-0.6
4,148,551	-				+0.4
4,148,551	-				+0.4
4,148,551	-				-0.7
4,148,551	-				+1.4
4,148,551	-				+0.4
4,148,580	+				-0.4
4,148,580	+				+0.4
4,148,581	-				-0.2
4,148,581	-				+0.4
4,148,581	-				-0.6
4,148,610	+				-0.6
4,148,611	-				-1.2
4,148,611	-				-0.6
4,148,611	-				+0.4
4,148,766	+		Pf6N2E2_3557	0.52	-1.9
4,148,767	-		Pf6N2E2_3557	0.53	-0.6
4,148,931	-				-1.2
4,148,990	+				+0.4
4,148,991	-				-0.6
4,149,091	+				+0.4
4,149,091	+				-0.9
4,149,091	+				-0.6
4,149,490	-		Pf6N2E2_3558	0.36	-0.6
4,149,490	-		Pf6N2E2_3558	0.36	+0.4
4,149,490	-		Pf6N2E2_3558	0.36	-0.3
4,149,630	+		Pf6N2E2_3558	0.50	-1.9
4,149,630	+		Pf6N2E2_3558	0.50	+0.4
4,149,630	+		Pf6N2E2_3558	0.50	-0.6
4,149,696	-		Pf6N2E2_3558	0.57	-1.2
4,149,781	+		Pf6N2E2_3558	0.66	+0.4
4,149,782	-		Pf6N2E2_3558	0.67	-0.6