Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3521

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
4,105,687	+				+0.4
4,105,688	-				-0.6
4,105,750	+				+0.4
4,105,750	+				-0.6
4,105,750	+				-0.6
4,105,750	+				-0.6
4,105,750	+				+0.4
4,105,750	+				-0.1
4,105,751	-				-2.0
4,105,751	-				-1.2
4,105,751	-				-0.6
4,105,751	-				-2.2
4,105,751	-				+0.4
4,105,751	-				+0.4
4,105,754	+				-0.3
4,105,754	+				-0.6
4,105,754	+				+0.4
4,105,754	+				-0.6
4,105,754	+				-1.2
4,105,754	+				-0.1
4,105,754	+				-0.6
4,105,755	-				+0.4
4,105,755	-				-1.2
4,105,755	-				-0.6
4,105,755	-				+0.4
4,105,755	-				-1.6
4,105,755	-				-0.6
4,105,755	-				-2.0
4,105,756	+				-0.6
4,105,756	+				-1.2
4,105,756	+				-0.6
4,105,756	+				+0.4
4,105,756	+				-1.6
4,105,756	+				-1.2
4,105,757	-				-1.8
4,105,757	-				-1.6
4,105,772	+				+0.4
4,105,772	+				+0.4
4,105,772	+				+0.4
4,105,772	+				+0.4
4,105,773	-				-1.2
4,105,811	+				+0.4
4,105,811	+				-0.6
4,106,086	+		Pf6N2E2_3521	0.11	+0.4
4,106,086	+		Pf6N2E2_3521	0.11	+0.4
4,106,215	+		Pf6N2E2_3521	0.15	-1.2
4,106,251	+		Pf6N2E2_3521	0.17	+0.4
4,106,251	+		Pf6N2E2_3521	0.17	-4.0
4,106,251	+		Pf6N2E2_3521	0.17	-2.0
4,106,251	+		Pf6N2E2_3521	0.17	+0.4
4,106,252	-		Pf6N2E2_3521	0.17	-2.3
4,106,252	-		Pf6N2E2_3521	0.17	-2.3
4,106,308	+		Pf6N2E2_3521	0.19	-2.3
4,106,308	+		Pf6N2E2_3521	0.19	+0.4
4,106,308	+		Pf6N2E2_3521	0.19	-3.1
4,106,308	+		Pf6N2E2_3521	0.19	+0.4
4,106,308	+		Pf6N2E2_3521	0.19	-1.2
4,106,309	-		Pf6N2E2_3521	0.19	+0.4
4,106,349	+		Pf6N2E2_3521	0.20	+0.4
4,106,369	-		Pf6N2E2_3521	0.21	+0.4
4,106,643	+		Pf6N2E2_3521	0.31	-1.6
4,106,658	+		Pf6N2E2_3521	0.31	+0.4
4,106,658	+		Pf6N2E2_3521	0.31	-1.2
4,106,668	+		Pf6N2E2_3521	0.32	-3.7
4,106,668	+		Pf6N2E2_3521	0.32	-2.2
4,106,668	+		Pf6N2E2_3521	0.32	+0.4
4,106,668	+		Pf6N2E2_3521	0.32	-1.6
4,106,668	+		Pf6N2E2_3521	0.32	-0.6
4,106,669	-		Pf6N2E2_3521	0.32	-3.0
4,106,669	-		Pf6N2E2_3521	0.32	-3.4
4,107,091	+		Pf6N2E2_3521	0.47	-0.6
4,107,091	+		Pf6N2E2_3521	0.47	+0.4
4,107,234	+		Pf6N2E2_3521	0.52	+0.4
4,107,234	+		Pf6N2E2_3521	0.52	+0.4
4,107,630	+		Pf6N2E2_3521	0.66	-2.4
4,107,630	+		Pf6N2E2_3521	0.66	+0.4
4,107,631	-		Pf6N2E2_3521	0.66	+0.4
4,107,752	+		Pf6N2E2_3521	0.70	-1.2
4,107,853	+		Pf6N2E2_3521	0.74	-3.0
4,108,050	+		Pf6N2E2_3521	0.81	-0.6
4,108,112	+		Pf6N2E2_3521	0.83	+0.4
4,108,112	+		Pf6N2E2_3521	0.83	-0.6
4,108,112	+		Pf6N2E2_3521	0.83	-2.2
4,108,112	+		Pf6N2E2_3521	0.83	-1.2
4,108,113	-		Pf6N2E2_3521	0.83	-2.3
4,108,113	-		Pf6N2E2_3521	0.83	+0.4
4,108,113	-		Pf6N2E2_3521	0.83	-0.6
4,108,390	-				+0.4
4,108,614	+				-1.6
4,108,614	+				+0.4
4,108,614	+				+0.4
4,108,615	-				-0.6
4,108,618	-				-0.6
4,108,670	+		Pf6N2E2_3522	0.19	-0.9
4,108,671	-		Pf6N2E2_3522	0.19	+0.4
4,108,671	-		Pf6N2E2_3522	0.19	+0.4
4,108,671	-		Pf6N2E2_3522	0.19	+0.4
4,108,671	-		Pf6N2E2_3522	0.19	+0.4
4,108,764	+		Pf6N2E2_3522	0.43	+0.4
4,108,765	-		Pf6N2E2_3522	0.43	-1.2
4,108,765	-		Pf6N2E2_3522	0.43	-0.6
4,108,765	-		Pf6N2E2_3522	0.43	-0.6
4,108,765	-		Pf6N2E2_3522	0.43	-0.5
4,108,787	+		Pf6N2E2_3522	0.49	-0.6
4,108,787	+		Pf6N2E2_3522	0.49	-0.6
4,108,788	-		Pf6N2E2_3522	0.49	+0.4
4,108,802	-		Pf6N2E2_3522	0.53	+0.4
4,108,802	-		Pf6N2E2_3522	0.53	+0.4
4,108,802	-		Pf6N2E2_3522	0.53	-0.5
4,109,045	+				+0.4
4,109,046	-				+1.7
4,109,063	+				-0.8
4,109,064	-				-2.0
4,109,064	-				+0.4
4,109,064	-				-0.0
4,109,064	-				-2.0
4,109,067	-				+0.4
4,109,126	+				+0.4
4,109,127	-				-1.0
4,109,127	-				-0.6
4,109,127	-				-0.6
4,109,127	-				+0.4
4,109,303	-				-0.6
4,109,303	-				+0.2
4,109,327	-				-0.6
4,109,327	-				-1.0
4,109,342	+		Pf6N2E2_3523	0.11	-0.4
4,109,368	-		Pf6N2E2_3523	0.14	+0.4
4,109,382	-		Pf6N2E2_3523	0.16	+0.1
4,109,461	+		Pf6N2E2_3523	0.27	-0.4
4,109,481	+		Pf6N2E2_3523	0.30	-1.2
4,109,481	+		Pf6N2E2_3523	0.30	+0.4
4,109,481	+		Pf6N2E2_3523	0.30	-1.2
4,109,481	+		Pf6N2E2_3523	0.30	-1.2
4,109,482	-		Pf6N2E2_3523	0.30	-0.5
4,109,482	-		Pf6N2E2_3523	0.30	-2.2
4,109,482	-		Pf6N2E2_3523	0.30	-0.6
4,109,482	-		Pf6N2E2_3523	0.30	+0.4
4,109,482	-		Pf6N2E2_3523	0.30	-1.2