Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3438

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
4,006,413	+		Pf6N2E2_3437	0.65	-0.4
4,006,413	+		Pf6N2E2_3437	0.65	+0.4
4,006,413	+		Pf6N2E2_3437	0.65	+0.4
4,006,413	+		Pf6N2E2_3437	0.65	-0.4
4,006,413	+		Pf6N2E2_3437	0.65	-1.2
4,006,414	-		Pf6N2E2_3437	0.65	+0.4
4,006,414	-		Pf6N2E2_3437	0.65	+0.4
4,006,414	-		Pf6N2E2_3437	0.65	+0.4
4,006,414	-		Pf6N2E2_3437	0.65	-1.6
4,006,416	+		Pf6N2E2_3437	0.65	+0.4
4,006,416	+		Pf6N2E2_3437	0.65	-0.5
4,006,416	+		Pf6N2E2_3437	0.65	-0.3
4,006,416	+		Pf6N2E2_3437	0.65	-0.7
4,006,416	+		Pf6N2E2_3437	0.65	-0.9
4,006,417	-		Pf6N2E2_3437	0.65	+0.4
4,006,419	+		Pf6N2E2_3437	0.65	+0.4
4,006,431	+		Pf6N2E2_3437	0.65	+0.4
4,006,431	+		Pf6N2E2_3437	0.65	-1.1
4,006,431	+		Pf6N2E2_3437	0.65	+0.4
4,006,431	+		Pf6N2E2_3437	0.65	-2.5
4,006,432	-		Pf6N2E2_3437	0.66	+0.4
4,006,434	+		Pf6N2E2_3437	0.66	-0.6
4,006,434	+		Pf6N2E2_3437	0.66	-2.0
4,006,435	-		Pf6N2E2_3437	0.66	+0.4
4,006,435	-		Pf6N2E2_3437	0.66	-0.3
4,006,500	+		Pf6N2E2_3437	0.68	+0.3
4,006,500	+		Pf6N2E2_3437	0.68	-1.1
4,006,501	-		Pf6N2E2_3437	0.68	-0.6
4,006,501	-		Pf6N2E2_3437	0.68	-0.6
4,006,632	+		Pf6N2E2_3437	0.73	-1.2
4,006,633	-		Pf6N2E2_3437	0.73	-0.1
4,006,633	-		Pf6N2E2_3437	0.73	+0.4
4,006,633	-		Pf6N2E2_3437	0.73	+0.4
4,006,633	-		Pf6N2E2_3437	0.73	-1.2
4,006,646	-		Pf6N2E2_3437	0.73	-0.6
4,006,665	-		Pf6N2E2_3437	0.74	-0.6
4,006,725	+		Pf6N2E2_3437	0.76	-1.2
4,006,725	+		Pf6N2E2_3437	0.76	+0.4
4,006,725	+		Pf6N2E2_3437	0.76	+0.4
4,006,725	+		Pf6N2E2_3437	0.76	+0.4
4,006,725	+		Pf6N2E2_3437	0.76	-0.6
4,006,731	+		Pf6N2E2_3437	0.76	+0.4
4,006,732	-		Pf6N2E2_3437	0.76	+0.7
4,006,732	-		Pf6N2E2_3437	0.76	+0.4
4,006,804	-		Pf6N2E2_3437	0.79	-0.6
4,006,804	-		Pf6N2E2_3437	0.79	+0.4
4,006,804	-		Pf6N2E2_3437	0.79	-1.2
4,006,824	+		Pf6N2E2_3437	0.80	+0.4
4,006,824	+		Pf6N2E2_3437	0.80	-1.0
4,006,825	-		Pf6N2E2_3437	0.80	+0.4
4,006,863	+		Pf6N2E2_3437	0.81	-1.2
4,006,864	-		Pf6N2E2_3437	0.81	+0.1
4,006,864	-		Pf6N2E2_3437	0.81	-0.6
4,006,864	-		Pf6N2E2_3437	0.81	+0.4
4,006,905	+		Pf6N2E2_3437	0.82	+0.4
4,006,906	-		Pf6N2E2_3437	0.83	-0.5
4,006,906	-		Pf6N2E2_3437	0.83	-0.6
4,006,919	-		Pf6N2E2_3437	0.83	-0.2
4,006,930	-		Pf6N2E2_3437	0.83	+0.4
4,006,969	+		Pf6N2E2_3437	0.85	-2.0
4,006,969	+		Pf6N2E2_3437	0.85	-0.9
4,006,969	+		Pf6N2E2_3437	0.85	-0.2
4,006,969	+		Pf6N2E2_3437	0.85	+0.4
4,006,970	-		Pf6N2E2_3437	0.85	+0.4
4,006,970	-		Pf6N2E2_3437	0.85	+0.4
4,007,066	+		Pf6N2E2_3437	0.88	+0.4
4,007,095	+		Pf6N2E2_3437	0.89	+0.4
4,007,095	+		Pf6N2E2_3437	0.89	-0.7
4,007,150	-				-2.0
4,007,197	+				-0.6
4,007,213	-				-0.6
4,007,313	+				-2.0
4,007,322	+				-1.2
4,007,322	+				+0.4
4,007,323	-				+0.8
4,007,344	+				-0.6
4,007,344	+				-1.2
4,007,345	-				+0.4
4,007,391	+				-1.6
4,007,391	+				+0.4
4,007,392	-				-2.5
4,007,392	-				-0.4
4,007,392	-				-0.2
4,007,392	-				-1.5
4,007,392	-				+0.4
4,007,614	-		Pf6N2E2_3438	0.58	-1.6
4,007,614	-		Pf6N2E2_3438	0.58	-0.6
4,007,642	-		Pf6N2E2_3438	0.66	-0.5
4,007,642	-		Pf6N2E2_3438	0.66	-0.6
4,007,685	-		Pf6N2E2_3438	0.77	-1.2
4,007,704	+		Pf6N2E2_3438	0.82	-1.2
4,007,704	+		Pf6N2E2_3438	0.82	+0.4
4,007,704	+		Pf6N2E2_3438	0.82	+0.4
4,007,704	+		Pf6N2E2_3438	0.82	+0.4
4,007,704	+		Pf6N2E2_3438	0.82	+0.4
4,007,705	-		Pf6N2E2_3438	0.83	-1.2
4,007,709	+		Pf6N2E2_3438	0.84	-0.6
4,007,710	-		Pf6N2E2_3438	0.84	-0.6
4,007,710	-		Pf6N2E2_3438	0.84	-0.6
4,007,799	+				-2.6
4,007,799	+				+0.4
4,007,799	+				+0.4
4,007,799	+				+0.4
4,007,799	+				+0.4
4,007,799	+				+0.4
4,007,800	-				-0.2
4,007,800	-				-2.2
4,007,800	-				-0.6
4,007,800	-				+0.4
4,007,800	-				+0.4
4,007,800	-				+0.4
4,007,800	-				+0.4
4,007,800	-				-0.6
4,007,814	+				-0.6
4,007,852	+				+0.4
4,007,853	-				-1.6
4,007,860	+				-1.3
4,007,863	+				-0.6
4,007,864	-				+0.4
4,008,334	-		Pf6N2E2_3439	0.29	-0.6
4,008,355	+		Pf6N2E2_3439	0.31	-0.7
4,008,356	-		Pf6N2E2_3439	0.31	-1.6
4,008,356	-		Pf6N2E2_3439	0.31	+0.4
4,008,358	+		Pf6N2E2_3439	0.31	-2.0
4,008,358	+		Pf6N2E2_3439	0.31	-0.9
4,008,358	+		Pf6N2E2_3439	0.31	+0.4
4,008,358	+		Pf6N2E2_3439	0.31	-0.4
4,008,358	+		Pf6N2E2_3439	0.31	-1.2
4,008,359	-		Pf6N2E2_3439	0.31	+0.4
4,008,359	-		Pf6N2E2_3439	0.31	-0.6
4,008,535	+		Pf6N2E2_3439	0.43	-2.2
4,008,536	-		Pf6N2E2_3439	0.43	-0.6
4,008,647	+		Pf6N2E2_3439	0.50	-0.6
4,008,648	-		Pf6N2E2_3439	0.51	+0.4
4,008,739	+		Pf6N2E2_3439	0.57	+0.4
4,008,739	+		Pf6N2E2_3439	0.57	-0.2
4,008,739	+		Pf6N2E2_3439	0.57	+0.4